Evidence map›Paper›PMID 11101595›Full record

ArticleJournal of clinical microbiology2000

Comparative genotyping of Candida albicans bloodstream and nonbloodstream isolates at a polymorphic microsatellite locus.

F Dalle, N Franco, J Lopez, O Vagner, D Caillot, P Chavanet, B Cuisenier, S Aho, S Lizard, A Bonnin

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Journal of clinical microbiology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
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  8. Article
  9. Molecular fingerprints to identify Candida species.BioMed research international · 2013
    Review
  10. Article
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  12. National surveillance of fungemia in Denmark (2004 to 2009).Journal of clinical microbiology · 2011
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 4 countries.

F DalleLaboratoire de Parasitologie et Mycologie, and Laboratoire de Génétique Moléculaire, Centre George François Leclerc, Dijon, France.
N Franco
J Lopez
O Vagner
D Caillot
P Chavanet
B Cuisenier
S Aho
S Lizard
A Bonnin
Institute of Parasitology · CZCentre Georges François Leclerc · FRHospital for Tropical Diseases · VNMinistère de la Santé et de l'Hygiène Publique · ML

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Molecular typing studies have shown that the predominant form of reproduction of Candida albicans is clonal and that, in a majority of situations, persistent or recurrent infections are due to a unique strain. Characterization of distinct subpopulations and correlation with clinical features may thus be important to understanding the pathogenesis of candidiasis. In a clonal model, a unique polymorphic marker may identify populations with different biological properties. We therefore compared 48 bloodstream isolates and 48 nonbloodstream matched strains of C. albicans at the elongation factor 3-encoding gene (CEF3) polymorphic microsatellite locus of C. albicans. Sizing of the alleles was performed by automated capillary electrophoresis. A new, 137-bp allele was characterized, and seven nondescribed combinations were observed, resulting in 15 and 11 distinct CEF3 profiles in bloodstream and control strains, respectively. Genotypes 126-135, 130-136, and 131-131 accounted for 60.4% of both bloodstream and control strains. Four bloodstream isolates but no control strains displayed the 135-135 combination. None of the other genotypes was present at an increased frequency in bloodstream isolates. Bloodstream and nonbloodstream strains of C. albicans thus have a heterogeneous structure at the CEF3 locus, with three major and multiple minor allelic combinations.

Indexed as

Microsatellite RepeatsAllelesCandida albicansChromosome MappingFungemiaGenotypeHumansMycological Typing TechniquesReproducibility of Results

Identifiers

PMID11101595
PMCPMC87636
OpenAlexW2154529513

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.