ArticlePlant molecular biology2000
Rice PHYC gene: structure, expression, map position and evolution.
Article in Plant molecular biology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
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Who cites it
29 citing papers in PubMed, 1 synthesis or guideline pooled it, 71 citations in OpenAlex.
- Pooled it
- A genome-wide association study using MyanmarBreeding science · 2024Article
- Early heading 7 interacts with DTH8, and regulates flowering time in rice.Plant cell reports · 2019Article
- The Rice Phytochrome Genes, PHYA and PHYB, Have Synergistic Effects on Anther Development and Pollen Viability.Scientific reports · 2017Article
- A CONSTANS-like transcriptional activator, OsCOL13, functions as a negative regulator of flowering downstream of OsphyB and upstream of Ehd1 in rice.Plant molecular biology · 2016Article
- Evolutionary divergence of phytochrome protein function in Zea mays PIF3 signaling.Journal of experimental botany · 2016Article
- Light-hormone interaction in the red-light-induced suppression of photomorphogenesis in rice seedlings.Protoplasma · 2016Article
- Article
- Genome-wide identification of microRNAs and their targets in wild type and phyB mutant provides a key link between microRNAs and the phyB-mediated light signaling pathway in rice.Frontiers in plant science · 2015Article
- The phytochrome B/phytochrome C heterodimer is necessary for phytochrome C-mediated responses in rice seedlings.PloS one · 2014Article
- Chlorophyll deficiency in the maize elongated mesocotyl2 mutant is caused by a defective heme oxygenase and delaying grana stacking.PloS one · 2013Article
- Cryptochrome and phytochrome cooperatively but independently reduce active gibberellin content in rice seedlings under light irradiation.Plant & cell physiology · 2012Article
- Overexpression of a phytochrome-regulated tandem zinc finger protein gene, OsTZF1, confers hypersensitivity to ABA and hyposensitivity to red light and far-red light in rice seedlings.Plant cell reports · 2012Article
- Genomic basis for light control of plant development.Protein & cell · 2012Review
- Phytochrome B control of total leaf area and stomatal density affects drought tolerance in rice.Plant molecular biology · 2012Article
- The multiple contributions of phytochromes to the control of internode elongation in rice.Plant physiology · 2011Article
- Complete loss of photoperiodic response in the rice mutant line X61 is caused by deficiency of phytochrome chromophore biosynthesis gene.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011Article
- Genetic redundancy in soybean photoresponses associated with duplication of the phytochrome A gene.Genetics · 2008Article
- Rhizome transition to storage organ is under phytochrome control in lotus (Nelumbo nucifera).Planta · 2007Article
- Whole-genome analysis of Oryza sativa reveals similar architecture of two-component signaling machinery with Arabidopsis.Plant physiology · 2006Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
6 authors at 3 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Although sequences representing members of the phytochrome (phy) family of photoreceptors have been reported in numerous species across the phylogenetic spectrum, relatively few phytochrome genes (PHY) have been fully characterized. Using rice, we have cloned and characterized the first PHYC gene from a monocot. Comparison of genomic and cDNA PHYC sequences shows that the rice PHYC gene contains three introns in the protein-coding region typical of most angiosperm PHY genes, in contrast to Arabidopsis PHYC, which lacks the third intron. Mapping of the transcription start site and 5'-untranslated region of the rice PHYC transcript indicates that it contains an unusually long, intronless, 5'-untranslated leader sequence of 715 bp. PHYC mRNA levels are relatively low compared to PHYA and PHYB mRNAs in rice seedlings, and are similar in dark- and light-treated seedlings, suggesting relatively low constitutive expression. Genomic mapping shows that the PHYA, PHYB, and PHYC genes are all located on chromosome 3 of rice, in synteny with these genes in linkage group C (sometimes referred to as linkage group A) of sorghum. Phylogenetic analysis indicates that rice phyC is closely related to sorghum phyC, but relatively strongly divergent from Arabidopsis phyC, the only full-length dicot phyC sequence available.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.