Evidence map›Paper›PMID 11092872›Full record

ArticleJournal of bacteriology2000

Transcription activation by a variety of AraC/XylS family activators does not depend on the class II-specific activation determinant in the N-terminal domain of the RNA polymerase alpha subunit.

S M Egan, A J Pease, J Lang, X Li, V Rao, W K Gillette, R Ruiz, J L Ramos, R E Wolf

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Bacterial transcriptional regulators for degradation pathways of aromatic compounds.Microbiology and molecular biology reviews : MMBR · 2004
    Review
  8. Growing repertoire of AraC/XylS activators.Journal of bacteriology · 2002
    Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

S M EganDepartment of Molecular Biosciences, University of Kansas, Lawrence, Kansas 66045, USA. sme@ukans.edu
A J Pease
J Lang
X Li
V Rao
W K Gillette
R Ruiz
J L Ramos
R E Wolf
Estación Experimental del Zaidín · ESUniversity of Maryland, Baltimore County · USUniversity of Kansas · USNational Institute of Diabetes and Digestive and Kidney Diseases · US

Funding

GROWTH RATE-DEPENDENT CONTROL OF GENE EXPRESSIONR01GM027113 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE · PI WOLF, RICHARD E · 1985 to 2005
$1.6M
Transcription Activation at the rhaBAD OperonR01GM055099 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI EGAN, SUSAN M · 2005 to 2008
$820k
TRANSCRIPTION ACTIVATION AT THE RHABAD OPERONR29GM055099 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI EGAN, SUSAN M · 1997 to 2001
$215k
NIGMS NIH HHS GM27113NIGMS NIH HHS GM55099NIGMS NIH HHS R01 GM027113NIGMS NIH HHS R01 GM055099NIGMS NIH HHS R29 GM055099
6 · The paper itself

Abstract

The N-terminal domain of the RNA polymerase alpha subunit (alpha-NTD) was tested for a role in transcription activation by a variety of AraC/XylS family members. Based on substitutions at residues 162 to 165 and an extensive genetic screen we conclude that alpha-NTD is not an activation target for these activators.

Indexed as

Escherichia coli ProteinsTranscriptional ActivationBacterial ProteinsCytarabineDNA-Binding ProteinsDNA-Directed RNA PolymerasesEscherichia coliMutationPseudomonas putidaSigma FactorTrans-ActivatorsTranscription FactorsBacterial ProteinsCytarabineDNA-Binding ProteinsDNA-Directed RNA PolymerasesEscherichia coli ProteinsRNA polymerase alpha subunitSigma Factorsigma factor KatF protein, BacteriaSoxS protein, E coliTrans-ActivatorsTranscription FactorsXylS protein, Pseudomonas putida

Identifiers

PMID11092872
PMCPMC94837
OpenAlexW2156108139

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.