Evidence map›Paper›PMID 11073984›Full record

ArticleMolecular and cellular biology2000

DNA integration by Ty integrase in yku70 mutant Saccharomyces cerevisiae cells.

M Kiechle, A A Friedl, P Manivasakam, F Eckardt-Schupp, R H Schiestl

Abstract read
In one paragraph

Article in Molecular and cellular biology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Ku and the Stability of the Genome.Journal of biomedicine & biotechnology · 2002
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

M KiechleInstitute of Radiobiology, GSF Research Center, D-85764 Neuherberg, Germany.
A A Friedl
P Manivasakam
F Eckardt-Schupp
R H Schiestl

Funding

NIEHS NIH HHS ES00299
6 · The paper itself

Abstract

In the present work we examined nonhomologous integration of plasmid DNA in a yku70 mutant. Ten of 14 plasmids integrated as composite elements, including Ty sequences probably originating from erroneous strand-switching and/or priming events. Three additional plasmids integrated via Ty integrase without cointegrating Ty sequences, as inferred from 5-bp target site duplication and integration site preferences. Ty integrase-mediated integration of non-Ty DNA has never been observed in wild-type cells, although purified integrase is capable of using non-Ty DNA as a substrate in vitro. Hence our data implicate yKu70 as the cellular function preventing integrase from accepting non-Ty DNA as a substrate.

Indexed as

Antigens, NuclearDNA HelicasesSaccharomyces cerevisiae ProteinsChromosomes, FungalDNA-Binding ProteinsDNA, FungalGene Transfer, HorizontalIntegrasesKu AutoantigenModels, GeneticMutationNuclear ProteinsPlasmidsRecombination, GeneticRetroelementsSaccharomyces cerevisiaeAntigens, NuclearDNA-Binding ProteinsDNA, FungalDNA Helicaseshigh affinity DNA-binding factor, S cerevisiaeIntegrasesKu AutoantigenNuclear ProteinsRetroelementsSaccharomyces cerevisiae ProteinsXRCC5 protein, humanXrcc6 protein, humanYKU70 protein, S cerevisiae

Identifiers

PMID11073984
PMCPMC86530

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.