Evidence map›Paper›PMID 11073904›Full record

ArticleJournal of bacteriology2000

Control of asgE expression during growth and development of Myxococcus xanthus.

A G Garza, B Z Harris, B M Greenberg, M Singer

Abstract read
In one paragraph

Article in Journal of bacteriology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. The σScientific reports · 2021
    Article
  2. Article
  3. Article
  4. Article
  5. Molecular dissection of the mycobacterial stringent response protein Rel.Protein science : a publication of the Protein Society · 2006
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

A G GarzaSection of Microbiology, University of California, Davis, Davis, California 95616, USA.
B Z Harris
B M Greenberg
M Singer

Funding

Control of Initiation of Development in M. xanthusR01GM054592 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI SINGER, MITCHELL H. · 2003 to 2006
$982k
CONTROL OF INITIATION OF DEVELOPMENT IN M XANTHUSR29GM054592 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI SINGER, MITCHELL H. · 1997 to 2001
$250k
PROPAGATION OF THE DEVELOPMENTAL PROGRAM IN M XANTHUSF32GM019080 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI GARZA, ANTHONY G · 1997 to 1998
–
NIGMS NIH HHS F32 GM019080NIGMS NIH HHS GM19080NIGMS NIH HHS GM54592NIGMS NIH HHS R01 GM054592NIGMS NIH HHS R29 GM054592
6 · The paper itself

Abstract

One of the earliest events in the Myxococcus xanthus developmental cycle is production of an extracellular cell density signal called A-signal (or A-factor). Previously, we showed that cells carrying an insertion in the asgE gene fail to produce normal levels of this cell-cell signal. In this study we found that expression of asgE is growth phase regulated and developmentally regulated. Several lines of evidence indicate that asgE is cotranscribed with an upstream gene during development. Using primer extension analyses, we identified two 5' ends for this developmental transcript. The DNA sequence upstream of one 5' end has similarity to the promoter regions of several genes that are A-signal dependent, whereas sequences located upstream of the second 5' end show similarity to promoter elements identified for genes that are C-signal dependent. Consistent with this result is our finding that mutants failing to produce A-signal or C-signal are defective for developmental expression of asgE. In contrast to developing cells, the large majority of the asgE transcript found in vegetative cells appears to be monocistronic. This finding suggests that asgE uses different promoters for expression during vegetative growth and development. Growth phase regulation of asgE is abolished in a relA mutant, indicating that this vegetative promoter is induced by starvation. The data presented here, in combination with our previous results, indicate that the level of AsgE in vegetative cells is sufficient for this protein to carry out its function during development.

Indexed as

Gene Expression Regulation, BacterialPhosphotransferasesSignal TransductionBacterial ProteinsBase SequenceChromosome MappingDNA, BacterialLigasesMolecular Sequence DataMutagenesis, InsertionalMyxococcus xanthusOperonRecombinant Fusion ProteinsRNA, BacterialAsgA protein, Myxococcus xanthusBacterial ProteinsDNA, Bacterialguanosine 3',5'-polyphosphate synthetasesLigasesPhosphotransferasesRecombinant Fusion ProteinsRNA, Bacterial

Identifiers

PMID11073904
PMCPMC111402

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.