Evidence map›Paper›PMID 11071930›Full record

ArticleNucleic acids research2000

The two Saccharomyces cerevisiae SUA7 (TFIIB) transcripts differ at the 3'-end and respond differently to stress.

B C Hoopes, G D Bowers, M J DiVisconte

Abstract read
In one paragraph

Article in Nucleic acids research, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Review
  2. Article
  3. Species-specific factors mediate extensive heterogeneity of mRNA 3' ends in yeasts.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  4. Article
  5. Yeast pheromone receptor genes STE2 and STE3 are differently regulated at the transcription and polyadenylation level.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  6. Article
  7. Article
  8. Rapid hyperosmotic coinduction of two tilapia (Oreochromis mossambicus) transcription factors in gill cells.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

B C HoopesDepartment of Biology, Colgate University, 13 Oak Drive, Hamilton, NY 13346, USA. bhoopes@mail.colgate.edu
G D Bowers
M J DiVisconte

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite much information as to the structure and function of the general transcription factors, little is known about the regulation of their expression. Transcription of the Saccharomyces cerevisiae SUA7 (TFIIB) gene results in the formation of two discrete transcripts. It was originally reported that the two transcripts were derived from two promoters separated by approximately 80 bp. We have found that the two transcripts are instead derived from a common promoter and differ at the 3'-end by approximately 115 bp. The longer of the two transcripts has an unusually long 3'-untranslated region. We have analyzed the levels of these transcripts under different cell growth conditions and find that the relative amounts of the two transcripts vary. Approximately equal amounts of each transcript are observed during exponential growth, but stresses and growth limiting conditions lead to a decrease in the relative amount of the larger transcript. These results suggest that the expression of the SUA7 gene may be controlled by regulation of 3'-end formation or mRNA stability. One of the general transcription factors, then, may be subject to regulation by a general response of the mRNA processing machinery.

Indexed as

Saccharomyces cerevisiae ProteinsTranscription Factor TFIIB3' Untranslated RegionsBase SequenceBlotting, NorthernDNA, ComplementaryGene Expression Regulation, FungalMolecular Sequence DataReverse Transcriptase Polymerase Chain ReactionRNA, FungalSaccharomyces cerevisiaeSequence Analysis, DNATranscription FactorsTranscription, Genetic3' Untranslated RegionsDNA, ComplementaryRNA, FungalSaccharomyces cerevisiae ProteinsSUA7 protein, S cerevisiaeTranscription FactorsTranscription Factor TFIIB

Identifiers

PMID11071930
PMCPMC113880

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.