Evidence map›Paper›PMID 11069033›Full record

ArticleLeukemia2000

Heterogeneity of the API2-MALT1 gene rearrangement in MALT-type lymphoma.

J Kalla, S Stilgenbauer, C Schaffner, S Wolf, G Ott, A Greiner, A Rosenwald, H Döhner, H K Müller-Hermelink, P Lichter

Abstract read
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In one paragraph

Article in Leukemia, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 63 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Ocular adnexal marginal zone B cell lymphoma: a clinical and pathologic study of 23 cases.Virchows Archiv : an international journal of pathology · 2006
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

J KallaOrganisation komplexer Genomé, Deutsches Krebsforschungszentrum, Heidelberg, Germany.
S Stilgenbauer
C Schaffner
S Wolf
G Ott
A Greiner
A Rosenwald
H Döhner
H K Müller-Hermelink
P Lichter
DKFZ-ZMBH Alliance · DEUniversity of Würzburg · DEUniversität Ulm · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The translocation t(11;18)(q21;q21), which is the most frequent chromosomal aberration in extranodal marginal zone B cell lymphomas of MALT-type, was characterised in a series of 34 biopsies, including 18 gastric non-Hodgkin's lymphomas (NHL) of MALT-type, six MALT-type NHL of extragastral origin and 10 extranodal large B cell lymphomas (LBL). Based on fluorescence in situ hybridisation, STS-PCR analysis and screening of genomic PAC libraries, a physical map of contiguous DNA probes on chromosome 11 was constructed containing the anti-apoptotic genes API2 and API1 adjacent to the translocation breakpoint. RACE-PCR experiments revealed MALT1 the chromosome 18-derived fusion partner of API2, which has also been reported recently by other groups. RT-PCR analysis and DNA sequencing demonstrated the expression of an API2-MALT1 fusion transcript in 18/24 gastral and extragastral MALT-type lymphomas. In none of 10 LBLs was a translocation specific RT-PCR product detected. Five variants of the fusion transcript were identified and in all instances the open reading frame of the fused portion of the MALT1 gene was maintained. The molecular analysis of these variants allowed the design of optimised assays for the diagnosis of the API2-MALT1 gene rearrangement.

Indexed as

Translocation, GeneticCaspasesChromosome MappingChromosomes, Human, Pair 11Chromosomes, Human, Pair 18HumansInhibitor of Apoptosis ProteinsIn Situ Hybridization, FluorescenceLung NeoplasmsLymphoma, B-Cell, Marginal ZoneLymphoma, Large B-Cell, DiffuseMucosa-Associated Lymphoid Tissue Lymphoma Translocation 1 ProteinNeoplasm ProteinsOncogene Proteins, FusionPolymerase Chain ReactionProteinsAPI2-MALT1 fusion protein, humanBIRC2 protein, humanCaspasesInhibitor of Apoptosis ProteinsMALT1 protein, humanMucosa-Associated Lymphoid Tissue Lymphoma Translocation 1 ProteinNeoplasm ProteinsOncogene Proteins, FusionProteinsUbiquitin-Protein Ligases

Identifiers

PMID11069033
OpenAlexW2326124472

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.