Evidence map›Paper›PMID 11063704›Full record

ArticleGenetics2000

Genetic basis of climatic adaptation in scots pine by bayesian quantitative trait locus analysis.

P Hurme, M J Sillanpää, E Arjas, T Repo, O Savolainen

Abstract readComparative Study
In one paragraph

Article in Genetics, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Genomics of Clinal Local Adaptation inG3 (Bethesda, Md.) · 2020
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Towards decoding the conifer giga-genome.Plant molecular biology · 2012
    Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Detection of quantitative trait loci controlling bud burst and height growth in Quercus robur L.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2004
    Article
  18. Article
  19. Mapping of quantitative trait loci (QTLs) affecting autumn freezing resistance and phenology in Salix.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2004
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

P HurmeDepartment of Biology, FIN-90014 University of Oulu, Finland. paivi.hurme@oulu.fi
M J Sillanpää
E Arjas
T Repo
O Savolainen

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We examined the genetic basis of large adaptive differences in timing of bud set and frost hardiness between natural populations of Scots pine. As a mapping population, we considered an "open-pollinated backcross" progeny by collecting seeds of a single F(1) tree (cross between trees from southern and northern Finland) growing in southern Finland. Due to the special features of the design (no marker information available on grandparents or the father), we applied a Bayesian quantitative trait locus (QTL) mapping method developed previously for outcrossed offspring. We found four potential QTL for timing of bud set and seven for frost hardiness. Bayesian analyses detected more QTL than ANOVA for frost hardiness, but the opposite was true for bud set. These QTL included alleles with rather large effects, and additionally smaller QTL were supported. The largest QTL for bud set date accounted for about a fourth of the mean difference between populations. Thus, natural selection during adaptation has resulted in selection of at least some alleles of rather large effect.

Indexed as

Chromosome MappingAcclimatizationBayes TheoremClimateCrosses, GeneticCycadopsidaEnvironmentFinlandGenotypeModels, GeneticRandom Amplified Polymorphic DNA TechniqueTrees

Identifiers

PMID11063704
PMCPMC1461308

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.