Evidence map›Paper›PMID 11060038›Full record

ArticleThe EMBO journal2000

Tup1p represses Mcm1p transcriptional activation and chromatin remodeling of an a-cell-specific gene.

I M Gavin, M P Kladde, R T Simpson

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 30 citations in OpenAlex.

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  5. Mcm1p binding sites in ARG1 positively regulate Gcn4p binding and SWI/SNF recruitment.Biochemical and biophysical research communications · 2009
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

I M GavinDepartment of Biochemistry and Molecular Biology, The Pennsylvania State University, 308 Althouse Laboratory, University Park, PA 16802, USA.
M P Kladde
R T Simpson
Pennsylvania State University · US

Funding

MOLECULAR MECHANISMS OF TRANSCRIPTIONAL REPRESSIONR01GM052311 · NIGMS · PENNSYLVANIA STATE UNIVERSITY-UNIV PARK · PI SCHLEGEL, ROBERT A · 1996 to 2003
$1.1M
CHROMATIN STRUCTURE IN LIVING CELLSR01GM052908 · NIGMS · PENNSYLVANIA STATE UNIVERSITY-UNIV PARK · PI SCHLEGEL, ROBERT A · 1995 to 2003
$1.1M
NIGMS NIH HHS GM52311NIGMS NIH HHS GM52908NIGMS NIH HHS R01 GM052311NIGMS NIH HHS R01 GM052908
6 · The paper itself

Abstract

In yeast, a number of regulatory proteins expressed only in specific cell types interact with general transcription factors in a combinatorial manner to control expression of cell-type-specific genes. We report a detailed analysis of activation and repression events that occur at the promoter of the a-cell-specific STE6 gene fused to a beta-galactosidase gene in a yeast minichromosome, as well as factors that control the chromatin structure of this promoter both in the minichromosome and in the genomic STE6 locus. Mcm1p results in chromatin remodeling and is responsible for all transcriptional activity from the STE6 promoter in both wild-type a and alpha cells. Matalpha2p cooperates with Tup1p to block both chromatin remodeling and Mcm1p-associated activation. While Matalpha2p represses only Mcm1p, the Tup1p-mediated repression involves both Mcm1p-dependent and -independent mechanisms. Swi/Snf and Gcn5p, required for full induction of the STE6 gene, do not contribute to chromatin remodeling. We suggest that Tup1p can contribute to repression by blocking transcriptional activators, in addition to interacting with transcription machinery and stabilizing chromatin.

Indexed as

Genes, FungalGlycoproteinsNuclear ProteinsSaccharomyces cerevisiae ProteinsATP-Binding Cassette TransportersBase SequenceChromatinDNA-Binding ProteinsDNA PrimersFungal ProteinsHomeodomain ProteinsMinichromosome Maintenance 1 ProteinOperator Regions, GeneticPromoter Regions, GeneticProtein BindingRepressor ProteinsATP-Binding Cassette TransportersChromatinCYC8 protein, S cerevisiaeDNA-Binding ProteinsDNA PrimersFungal ProteinsGlycoproteinsHomeodomain ProteinsMATA2 protein, S cerevisiaeMinichromosome Maintenance 1 ProteinNuclear ProteinsRepressor ProteinsSaccharomyces cerevisiae ProteinsSTE12 protein, S cerevisiaeSTE6 protein, S cerevisiaeTranscription FactorsTUP1 protein, S cerevisiae

Identifiers

PMID11060038
PMCPMC305800
OpenAlexW2151278496

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.