Evidence map›Paper›PMID 11058115›Full record

ArticleNucleic acids research2000

Proteolysis of the human DNA polymerase epsilon catalytic subunit by caspase-3 and calpain specifically during apoptosis.

W Liu, S Linn

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 22 citations in OpenAlex.

  1. Alkaloid fromFrontiers in pharmacology · 2022
    Article
  2. Cell-Cycle Cross Talk with Caspases and Their Substrates.Cold Spring Harbor perspectives in biology · 2020
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

W LiuDivision of Biochemistry and Molecular Biology, 229 Stanley Hall, University of California, Berkeley, CA 94720-3206, USA.
S Linn
University of California, Berkeley · US

Funding

STUDIES OF ENVIRONMENTAL MUTAGENS AND CARCINOGENST32ES007075 · NIEHS · UNIVERSITY OF CALIFORNIA BERKELEY · PI BJELDANES, LEONARD F · 1985 to 2004
$865k
STUDIES OF DNA POLYMERASESR01GM030415 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI LINN, STUART M · 1985 to 1999
–
NIEHS NIH HHS P30ES08196NIEHS NIH HHS T32 ES007075NIEHS NIH HHS T32-ES07075NIGMS NIH HHS 1RO1GM30415
6 · The paper itself

Abstract

Human DNA polymerase epsilon (pol epsilon) normally contains a 261-kDa catalytic subunit (p261), but from some sources it is isolated as a 140-kDa catalytic core of p261. This shortened form possesses normal or somewhat enhanced polymerase activity and its significance is unknown. We report here that caspase-3 and calpain can form p140 from p261 in vitro and in vivo and that during early stages of apoptosis induced in Jurkat cells by staurosporine or anti-Fas-activating antibody, p261 is cleaved into p140 by caspase-3. At later stages, activated calpain might also contribute to this conversion. The sites of cleavage by caspase-3 have been identified, and mutations at these 'DEAD boxes' resulted in cleavage-resistant enzyme. Cleavage at these sites separates the 'N-terminal catalytic core' from the 'C-terminal' regions described for p261. Cleavage does not occur during necrosis or following exposure to H(2)O(2) or methanesulfonic acid methyl ester. p140 is unlikely to be able to functionally replace p261 in vivo, since it does not bind to PCNA or the other pol epsilon subunits.

Indexed as

ApoptosisCatalytic DomainProtein Processing, Post-TranslationalAmino Acid SequenceBinding SitesBlotting, WesternCalpainCaspase 3CaspasesCell CycleDNA DamageDNA FragmentationDNA Polymerase IIHumansHydrogen PeroxideJurkat CellsCalpainCASP3 protein, humanCaspase 3CaspasesDNA Polymerase IIHydrogen PeroxideMethyl MethanesulfonateMutagensPeptide FragmentsPoly(ADP-ribose) Polymerases

Identifiers

PMID11058115
PMCPMC113151
OpenAlexW2143182403

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.