Evidence map›Paper›PMID 11053391›Full record

ArticleJournal of bacteriology2000

Characterization of a novel outer membrane hemin-binding protein of Porphyromonas gingivalis.

S G Dashper, A Hendtlass, N Slakeski, C Jackson, K J Cross, L Brownfield, R Hamilton, I Barr, E C Reynolds

Open access · greenAbstract readComparative Study
In one paragraph

Article in Journal of bacteriology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it, 92 citations in OpenAlex.

  1. Pooled it
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  17. Outer membrane lipoprotein biogenesis: Lol is not the end.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2015
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

S G DashperSchool of Dental Science, The University of Melbourne, Melbourne, Victoria, Australia.
A Hendtlass
N Slakeski
C Jackson
K J Cross
L Brownfield
R Hamilton
I Barr
E C Reynolds
University of Melbourne · AUCSL (Australia) · AUCSL (United Kingdom) · GB

Funding

PORPHYROMONAS GINGIVALIS GENOME PROJECTR01DE012082 · NIDCR · INSTITUTE FOR GENOMIC RESEARCH · PI FLEISCHMANN, ROBERT D · 1997 to 1998
–
NIDCR NIH HHS DE12082
6 · The paper itself

Abstract

Porphyromonas gingivalis is a gram-negative, anaerobic coccobacillus that has been implicated as a major etiological agent in the development of chronic periodontitis. In this paper, we report the characterization of a protein, IhtB (iron heme transport; formerly designated Pga30), that is an outer membrane hemin-binding protein potentially involved in iron assimilation by P. gingivalis. IhtB was localized to the cell surface of P. gingivalis by Western blot analysis of a Sarkosyl-insoluble outer membrane preparation and by immunocytochemical staining of whole cells using IhtB peptide-specific antisera. The protein, released from the cell surface, was shown to bind to hemin using hemin-agarose. The growth of heme-limited, but not heme-replete, P. gingivalis cells was inhibited by preincubation with IhtB peptide-specific antisera. The ihtB gene was located between an open reading frame encoding a putative TonB-linked outer membrane receptor and three open reading frames that have sequence similarity to ATP binding cassette transport system operons in other bacteria. Analysis of the deduced amino acid sequence of IhtB showed significant similarity to the Salmonella typhimurium protein CbiK, a cobalt chelatase that is structurally related to the ATP-independent family of ferrochelatases. Molecular modeling indicated that the IhtB amino acid sequence could be threaded onto the CbiK fold with the IhtB structural model containing the active-site residues critical for chelatase activity. These results suggest that IhtB is a peripheral outer membrane chelatase that may remove iron from heme prior to uptake by P. gingivalis.

Indexed as

Amino Acid SequenceAntibodies, BacterialBacterial Outer Membrane ProteinsBlotting, WesternCarrier ProteinsCulture MediaHeme-Binding ProteinsHemeproteinsImmune SeraIronMolecular Sequence DataPorphyromonas gingivalisProtein ConformationSequence AlignmentAntibodies, BacterialBacterial Outer Membrane ProteinsCarrier ProteinsCulture MediaHeme-Binding ProteinsHemeproteinsIhtB protein, Porphyromonas gingivalisImmune SeraIron

Identifiers

PMID11053391
PMCPMC94793
OpenAlexW2101673942

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.