ArticlePlant molecular biology2000
Characterisation of complementary DNAs from the expressed sequence tag analysis of life cycle stages of Laminaria digitata (Phaeophyceae).
Article in Plant molecular biology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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Who cites it
16 citing papers in PubMed, 72 citations in OpenAlex.
- Host-Parasite interaction between brown algae and eukaryote biotrophic pathogens.Current research in microbial sciences · 2024Article
- Environmental Control of Vanadium Haloperoxidases and Halocarbon Emissions in Macroalgae.Marine biotechnology (New York, N.Y.) · 2018Review
- Infection of the brown alga Ectocarpus siliculosus by the oomycete Eurychasma dicksonii induces oxidative stress and halogen metabolism.Plant, cell & environment · 2016Article
- Preferential expression of a bromoperoxidase in sporophytes of a red alga, Pyropia yezoensis.Marine biotechnology (New York, N.Y.) · 2015Article
- Agrigenomics for microalgal biofuel production: an overview of various bioinformatics resources and recent studies to link OMICS to bioenergy and bioeconomy.Omics : a journal of integrative biology · 2013Review
- Investigation of proteomic profiles of lamina of Ecklonia kurome (Laminariales): homology-based cross-species protein identification and analysis of the post-translational processing of vanadium-dependent bromoperoxidases using MALDI-TOF/TOF.Marine biotechnology (New York, N.Y.) · 2013Article
- Transcriptomic analysis of metabolic function in the giant kelp, Macrocystis pyrifera, across depth and season.The New phytologist · 2013Article
- Transcriptomic analysis of acclimation to temperature and light stress in Saccharina latissima (Phaeophyceae).PloS one · 2012Article
- Identification of copper-induced genes in the marine alga Ulva compressa (Chlorophyta).Marine biotechnology (New York, N.Y.) · 2011Article
- Genetic engineering of algae for enhanced biofuel production.Eukaryotic cell · 2010Review
- An expressed sequence tag analysis of the intertidal brown seaweeds Fucus serratus (L.) and F. vesiculosus (L.) (Heterokontophyta, Phaeophyceae) in response to abiotic stressors.Marine biotechnology (New York, N.Y.) · 2010Article
- NADPH oxidases in Eukaryotes: red algae provide new hints!Current genetics · 2006Article
- Vanadium-dependent iodoperoxidases in Laminaria digitata, a novel biochemical function diverging from brown algal bromoperoxidases.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2005Article
- Paths toward algal genomics.Plant physiology · 2005Review
- Characterization of mannuronan C-5-epimerase genes from the brown alga Laminaria digitata.Plant physiology · 2003Article
- Genome properties of the diatom Phaeodactylum tricornutum.Plant physiology · 2002Article
Corrections and comments
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Authors and funding
5 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Laminariales (Phaeophyceae, Heterokonta) are characterised by a heteromorphic digenetic life cycle with a filamentous, microscopic gametophyte and a highly evolved, macroscopic sporophyte. With the ultimate goal of comparing gene expression in each life cycle stage, complementary DNA libraries were constructed from sporophytes and gametophytes of Laminaria digitata. A set of ca. 500 expressed sequence tags (EST) was generated from each life history phase, by single-run partial sequencing of randomly picked cDNA clones. Comparison of the EST deduced amino acid sequences with database protein sequences assigned a putative identity for 39% of the 412 gametophyte clones and 48% of the 493 sporophyte clones sequenced thus far. These data represent more than 152 different proteins now probably identified in L. digitata. Several of those newly identified proteins are of interest to our understanding of the molecular physiology of kelps, for example their carbon-concentrating mechanisms, cell wall biosynthesis and halogen metabolism. EST analysis also confirmed that genes with long 3'-UTRs are widespread in Laminariales and the study of 5'-UTRs allowed the identification of a Kozak consensus sequence, c(A/C)A(A/C)CAUGGc(G/T). Several potential developmentally regulated differences in gene expression are discussed.
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