Evidence map›Paper›PMID 11044123›Full record

ArticleJournal of virology2000

Thogoto virus matrix protein is encoded by a spliced mRNA.

G Kochs, F Weber, S Gruber, A Delvendahl, C Leitz, O Haller

Abstract read
In one paragraph

Article in Journal of virology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 28 citations in OpenAlex.

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  10. Genomic and antigenic characterization of Jos virus.The Journal of general virology · 2012
    Article
  11. Article
  12. Article
  13. Article
  14. Interferon, Mx, and viral countermeasures.Cytokine & growth factor reviews
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

G KochsAbteilung für Virologie, Institut für Medizinische Mikrobiologie und Hygiene, Universitätsklinikum Freiburg, D-79008 Freiburg, Germany. KOCHS@UKL.UNI-FREIBURG.DE
F Weber
S Gruber
A Delvendahl
C Leitz
O Haller
University Medical Center Freiburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Thogoto virus (THOV) is a tick-transmitted orthomyxovirus with a segmented, negative-stranded RNA genome. In this study, we investigated the coding strategy of RNA segment 6 and found that it contains 956 nucleotides and codes for the matrix (M) protein. The full-length cDNA contains a single, long reading frame that lacks a stop codon but has coding capacity for a putative 35-kDa protein. In contrast, the M protein of THOV has an apparent molecular mass of 29 kDa as assessed by polyacrylamide gel electrophoresis. Therefore, we investigated the possibility of posttranscriptional processing of segment 6 transcripts by reverse transcription-PCR and identified a spliced mRNA that contains a stop codon and is translated into the 29-kDa M protein. Interestingly, the nontemplated UGA stop codon is generated by the splicing event itself. Thus, the unusual M coding strategy of THOV resembles that of Influenza C virus.

Indexed as

RNA SplicingAmino Acid SequenceBase SequenceCloning, MolecularMolecular Sequence DataRecombinant ProteinsReverse Transcriptase Polymerase Chain ReactionRNA, MessengerSequence Analysis, DNAThogotovirusViral Matrix ProteinsRecombinant ProteinsRNA, MessengerViral Matrix Proteins

Identifiers

PMID11044123
PMCPMC110953
OpenAlexW2110841463

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.