Evidence map›Paper›PMID 11041886›Full record

ArticleThe Plant cell2000

HRT gene function requires interaction between a NAC protein and viral capsid protein to confer resistance to turnip crinkle virus.

T Ren, F Qu, T J Morris

Open access · greenAbstract read
In one paragraph

Article in The Plant cell, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed
19.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 260 citations in OpenAlex.

  1. Article
  2. Isolation and Expression Pattern Analysis ofPlants (Basel, Switzerland) · 2025
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  5. The Role of Plant Transcription Factors in the Fight against Plant Viruses.International journal of molecular sciences · 2023
    Review
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  7. Article
  8. Review
  9. Article
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  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Gene Expression Analysis of InducedInternational journal of molecular sciences · 2021
    Article
  17. Microarray analysis ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  18. p24Viruses · 2020
    Article
  19. Article
  20. Article

31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

T RenSchool of Biological Sciences, University of Nebraska-Lincoln, Lincoln, Nebraska 68588-0118, USA.
F Qu
T J Morris
University of Nebraska–Lincoln · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An Arabidopsis protein was found to interact specifically with the capsid protein (CP) of turnip crinkle virus (TCV) through yeast two-hybrid screening. This protein, designated TIP (for TCV-interacting protein), was found to be a member of the recently recognized NAC family of proteins. NAC proteins have been implicated in the regulation of development of plant embryos and flowers. TIP alone was able to activate expression of reporter genes in yeast if fused to a DNA binding domain, suggesting that it may be a transcriptional activator. The TIP binding region in the TCV CP has been mapped to the N-terminal 25 amino acids. Site-directed mutagenesis within this region revealed that loss of the TIP-CP interaction in the yeast two-hybrid assay correlated with loss of the ability of TCV to induce the hypersensitive response and resistance in the TCV-resistant Arabidopsis ecotype Dijon (Di-0 and its inbred line Di-17). These data suggest that TIP is an essential component in the TCV resistance response pathway.

Indexed as

Bacterial ProteinsAmino Acid SequenceArabidopsisArabidopsis ProteinsBase SequenceCapsidCarmovirusDNA-Binding ProteinsMolecular Sequence DataPlant ProteinsPolymerase Chain ReactionRepressor ProteinsReverse Transcriptase Polymerase Chain ReactionSequence AlignmentSequence Homology, Amino AcidTranscription FactorsArabidopsis ProteinsBacterial ProteinsDNA-Binding ProteinsHRT protein, ArabidopsisNAC protein, bacteriaPlant ProteinsRepressor ProteinsTIP protein, ArabidopsisTranscription Factors

Identifiers

PMID11041886
PMCPMC149129
OpenAlexW2165148163

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.