Evidence map›Paper›PMID 11035723›Full record

ArticleInfection and immunity2000

Genetic diversity of the capsular polysaccharide C biosynthesis region of Bacteroides fragilis.

L E Comstock, A Pantosti, D L Kasper

Open access · greenAbstract read
In one paragraph

Article in Infection and immunity, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 16 citations in OpenAlex.

  1. High-throughput analyses ofGut microbes · 2026
    Article
  2. Article
  3. Gut SymbiontmBio · 2017
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Genomic analysis of Bacteroides fragilis reveals extensive DNA inversions regulating cell surface adaptation.Proceedings of the National Academy of Sciences of the United States of America · 2004
    Article
  12. Mpi recombinase globally modulates the surface architecture of a human commensal bacterium.Proceedings of the National Academy of Sciences of the United States of America · 2003
    Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

L E ComstockChanning Laboratory, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts 02115, USA. lcomstock@channing.harvard.edu
A Pantosti
D L Kasper
Brigham and Women's Hospital · USIstituto Superiore di Sanità · IT

Funding

Regulation of the multiple polysaccharides of Bacteroides fragilisR01AI044193 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI COMSTOCK, LAURIE E · 1999 to 2010
$2.7M
PATHOGENIC MECHANISMS OF ANAEROBES IN SEPSISR01AI039576 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI KASPER, DENNIS L. · 1997 to 2007
$2.4M
Regulation of the multiple polysaccharides of Bacteroides fragilisR56AI044193 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI COMSTOCK, LAURIE E · 2008 to 2008
$344k
PATHOGENIC MECHANISMS OF ANAEROBES IN SEPSISR21AI039576 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI KASPER, DENNIS L. · 1996 to 1996
–
NIAID NIH HHS AI39576NIAID NIH HHS AI44193NIAID NIH HHS R01 AI039576NIAID NIH HHS R01 AI044193NIAID NIH HHS R56 AI044193
6 · The paper itself

Abstract

A genetic approach was used to assess the heterogeneity of the capsular polysaccharide C (PS C) biosynthesis locus of Bacteroides fragilis and to determine whether distinct loci contain genes whose products are likely to be involved in conferring charged groups that enable the B. fragilis capsular polysaccharides to induce abscesses. A collection of 50 B. fragilis strains was examined. PCR analysis demonstrated that the genes flanking the PS C biosynthesis region are conserved, whereas the genes within the loci are heterogeneous. Only cfiA(+) B. fragilis strains, which represent 3% of the clinical isolates of B. fragilis, displayed heterogeneity in the regions flanking the polysaccharide biosynthesis genes. Primers were designed in the conserved regions upstream and downstream of the PS C locus and were used to amplify the region from 45 of the 50 B. fragilis strains studied. Fourteen PS C genetic loci could be differentiated by a combination of PCR and extended PCR. These loci ranged in size from 14 to 26 kb. Hybridization analysis with genes from the PS C loci of strains 9343 and 638R revealed that the majority of strains contain homologs of wcgC (N-acetylmannosamine dehydrogenase), wcfF (putative dehydrogenase), and wcgP (putative aminotransferase). The data suggest that the synthesis of polysaccharides that have zwitterionic characteristics rendering them able to induce abscesses is common in B. fragilis.

Indexed as

Genetic VariationAntibodies, MonoclonalBacterial CapsulesBacteroides fragilisChromosome MappingPolymerase Chain ReactionAntibodies, Monoclonal

Identifiers

PMID11035723
PMCPMC97697
OpenAlexW2061208294

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.