Evidence map›Paper›PMID 11013223›Full record

ArticleThe EMBO journal2000

Quorum-sensing signal binding results in dimerization of TraR and its release from membranes into the cytoplasm.

Y Qin, Z Q Luo, A J Smyth, P Gao, S Beck von Bodman, S K Farrand

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
21.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 157 citations in OpenAlex.

  1. Review
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  12. Single cell super-resolution imaging of E. coli OmpR during environmental stress.Integrative biology : quantitative biosciences from nano to macro · 2015
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. QsIA disrupts LasR dimerization in antiactivation of bacterial quorum sensing.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
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  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Y QinDepartment of Crop Sciences, 1201 West Gregory Drive, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.
Z Q Luo
A J Smyth
P Gao
S Beck von Bodman
S K Farrand
University of Illinois Urbana-Champaign · USUniversity of Connecticut · US

Funding

CELL-CELL SIGNALLING IN MICROBE-HOST INTERACTIONSR01GM052465 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI FARRAND, STEPHEN KENDALL · 1995 to 2007
$2.6M
NIGMS NIH HHS R01 GM052465NIGMS NIH HHS R01 GM52465
6 · The paper itself

Abstract

Promoter binding by TraR and LuxR, the activators of two bacterial quorum-sensing systems, requires their cognate acyl-homoserine lactone (acyl-HSL) signals, but the role the signal plays in activating these transcription factors is not known. Soluble active TraR, when purified from cells grown with the acyl-HSL, contained bound signal and was solely in dimer form. However, genetic and cross-linking studies showed that TraR is almost exclusively in monomer form in cells grown without signal. Adding signal resulted in dimerization of the protein in a concentration-dependent manner. In the absence of signal, monomer TraR localized to the inner membrane while growth with the acyl-HSL resulted in the appearance of dimer TraR in the cytoplasmic compartment. Affinity chromatography indicated that the N-terminus of TraR from cells grown without signal is hidden. Analysis of heterodimers formed between TraR and its deletion mutants localized the dimerization domain to a region between residues 49 and 156. We conclude that binding signal drives dimerization of TraR and its release from membranes into the cytoplasm.

Indexed as

Signal Transduction4-ButyrolactoneAcylationAgrobacterium tumefaciensBacterial ProteinsBlotting, WesternCell FractionationCell MembraneChromatography, GelCytoplasmDimerizationElectrophoresis, Polyacrylamide GelEscherichia coliIntracellular MembranesMembrane ProteinsModels, Biological4-ButyrolactoneBacterial Proteinshomoserine lactoneLuxR autoinducer binding proteinsMembrane ProteinsRepressor ProteinsTrans-ActivatorsTraR protein, Agrobacterium tumefaciens

Identifiers

PMID11013223
PMCPMC302097
OpenAlexW2060182791

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.