Evidence map›Paper›PMID 11007889›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2000

The architectural transcription factor high mobility group I(Y) participates in photoreceptor-specific gene expression.

K Y Chau, N Munshi, A Keane-Myers, K W Cheung-Chau, A K Tai, G Manfioletti, C K Dorey, D Thanos, D J Zack, S J Ono

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 41 citations in OpenAlex.

  1. HMGA Genes and Proteins in Development and Evolution.International journal of molecular sciences · 2020
    Review
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  7. Identification of candidate cancer genes involved in human retinoblastoma by data mining.Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery · 2008
    Article
  8. Review
  9. Article
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  11. Evolution of photosensory pineal organs in new light: the fate of neuroendocrine photoreceptors.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2003
    Review
  12. Article
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 2 countries.

K Y ChauThe Schepens Eye Research Institute, Harvard Medical School, Boston, Massachusetts 02114, USA.
N Munshi
A Keane-Myers
K W Cheung-Chau
A K Tai
G Manfioletti
C K Dorey
D Thanos
D J Zack
S J Ono
Massachusetts Eye and Ear Infirmary · USColumbia University · USHarvard University · USJohns Hopkins University · USSmith-Kettlewell Eye Research Institute · USUniversity of Trieste · IT

Funding

NEI NIH HHS R01 EY1901
6 · The paper itself

Abstract

The nonhistone chromosomal proteins high mobility group I(Y) [HMG I(Y)] have been shown to function as architectural transcription factors facilitating enhanceosome formation on a variety of mammalian promoters. Specifically, they have been shown to act as a "molecular glue" mediating protein-protein and protein-DNA contacts within the enhanceosome complex. HMG I(Y) proteins are expressed at high levels in embryonic and transformed cells and have been implicated in transcriptional regulation in these cells. Terminally differentiated cells, however, have been reported to express only minimal, if any, HMG I(Y). In contrast to these observations, we show here that adult mouse retinal photoreceptors, which are terminally differentiated cells, express high levels of these proteins. Using retinoblastoma cells as an approximate model, we further demonstrate in transiently transfected cells that inhibition of HMG I(Y) expression and mutation of HMG I(Y) binding sites significantly reduce rhodopsin promoter activity. DNase I footprint analysis indicates that HMG I protein interacts with a discrete site within the rhodopsin proximal promoter. This site overlaps with the binding site for Crx, a paired-like homeodomain transcription factor that is essential for photoreceptor functioning and that when mutated causes several forms of human photoreceptor degeneration. Both biochemical and functional experiments demonstrate that HMG I(Y) physically associate with Crx and that their interaction with DNA is required for high-level transcription of the rhodopsin gene. These data provide the first demonstration that HMG I(Y) can be important for gene activation in terminally differentiated cells.

Indexed as

AnimalsBinding SitesCell DifferentiationDNA FootprintingGene Expression RegulationGreen Fluorescent ProteinsHigh Mobility Group ProteinsHMGA1a ProteinHomeodomain ProteinsLuminescent ProteinsMiceMice, Inbred StrainsMutagenesis, Site-DirectedPhotoreceptor Cells, VertebratePromoter Regions, GeneticProtein Bindingcone rod homeobox proteinGreen Fluorescent ProteinsHigh Mobility Group ProteinsHMGA1a ProteinHomeodomain ProteinsLuminescent ProteinsRhodopsinRNARNA, AntisenseTrans-ActivatorsTranscription Factors

Identifiers

PMID11007889
PMCPMC6772757
OpenAlexW1526137086

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.