Evidence map›Paper›PMID 10995474›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2000

Adaptive evolution of a candidate gene for aging in Drosophila.

P S Schmidt, D D Duvernell, W F Eanes

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

P S SchmidtDepartment of Ecology and Evolution, State University of New York at Stony Brook, Stony Brook, NY 11794-5245, USA.
D D Duvernell
W F Eanes

Funding

METABOLIC CONTROL AND MOLECULAR ADAPTATION IN DROSOPHILAR01GM045247 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI EANES, WALTER F. · 1991 to 2005
$1.3M
NIGMS NIH HHS GM-45247NIGMS NIH HHS R01 GM045247
6 · The paper itself

Abstract

Examination of the phenotypic effects of specific mutations has been extensively used to identify candidate genes affecting traits of interest. However, such analyses do not reveal anything about the evolutionary forces acting at these loci, or whether standing allelic variation contributes to phenotypic variance in natural populations. The Drosophila gene methuselah (mth) has been proposed as having major effects on organismal stress response and longevity phenotype. Here, we examine patterns of polymorphism and divergence at mth in population level samples of Drosophila melanogaster, D. simulans, and D. yakuba. Mth has experienced an unusually high level of adaptive amino acid divergence concentrated in the intra- and extracellular loop domains of the receptor protein, suggesting the historical action of positive selection on those regions of the molecule that modulate signal transduction. Further analysis of single nucleotide polymorphisms (SNPs) in D. melanogaster provided evidence for contemporary and spatially variable selection at the mth locus. In ten surveyed populations, the most common mth haplotype exhibited a 40% cline in frequency that coincided with population level differences in multiple life-history traits including lifespan. This clinal pattern was not associated with any particular SNP in the coding region, indicating that selection is operating at a closely linked site that may be involved in gene expression. Together, these consistently nonneutral patterns of inter- and intraspecific variation suggest adaptive evolution of a signal transduction pathway that may modulate lifespan in nature.

Indexed as

Drosophila ProteinsEvolution, MolecularGenes, InsectReceptors, G-Protein-CoupledAdaptation, BiologicalAgingAnimalsDrosophilaInsect ProteinsMolecular Sequence DataReceptors, Cell SurfaceDrosophila ProteinsInsect Proteinsmth protein, DrosophilaReceptors, Cell SurfaceReceptors, G-Protein-Coupled

Identifiers

PMID10995474
PMCPMC27114

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.