Evidence map›Paper›PMID 10978287›Full record

ArticleGenetics2000

Deletion of a conserved regulatory element in the Drosophila Adh gene leads to increased alcohol dehydrogenase activity but also delays development.

J Parsch, J A Russell, I Beerman, D L Hartl, W Stephan

Abstract read
In one paragraph

Article in Genetics, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.6field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 32 citations in OpenAlex.

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  11. Parallel evolution of chimeric fusion genes.Proceedings of the National Academy of Sciences of the United States of America · 2005
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

J ParschDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, Massachusetts 02138, USA. jparsch@oeb.harvard.edu
J A Russell
I Beerman
D L Hartl
W Stephan
Harvard University · USUniversity of Rochester · US

Funding

EVOL BY MUTATIONS WITH COMPENSATORY FITNESS INTERACTIONSR01GM058405 · NIGMS · UNIVERSITY OF ROCHESTER · PI STEPHEN, WOLFGANG · 1998 to 2000
$248k
NIGMS NIH HHS GM02150NIGMS NIH HHS GM58405
6 · The paper itself

Abstract

In vivo levels of enzymatic activity may be increased through either structural or regulatory changes. Here we use Drosophila melanogaster alcohol dehydrogenase (ADH) in an experimental test for selective differences between these two mechanisms. The well-known ADH-Slow (S)/Fast (F) amino acid replacement leads to a twofold increase in activity by increasing the catalytic efficiency of the enzyme. Disruption of a highly conserved, negative regulatory element in the Adh 3' UTR also leads to a twofold increase in activity, although this is achieved by increasing in vivo Adh mRNA and protein concentrations. These two changes appear to be under different types of selection, with positive selection favoring the amino acid replacement and purifying selection maintaining the 3' UTR sequence. Using transgenic experiments we show that deletion of the conserved 3' UTR element increases adult and larval Adh expression in both the ADH-F and ADH-S genetic backgrounds. However, the 3' UTR deletion also leads to a significant increase in developmental time in both backgrounds. ADH allozyme type has no detectable effect on development. These results demonstrate a negative fitness effect associated with Adh overexpression. This provides a mechanism whereby natural selection can discriminate between alternative pathways of increasing enzymatic activity.

Indexed as

Genes, Insect3' Untranslated RegionsAlcohol DehydrogenaseAnimalsBase SequenceConserved SequenceDNA PrimersDrosophila melanogasterFemaleGenes, RegulatorLarvaMaleSequence DeletionTissue Distribution3' Untranslated RegionsAlcohol DehydrogenaseDNA Primers

Identifiers

PMID10978287
PMCPMC1461225
OpenAlexW1842042385

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.