Evidence map›Paper›PMID 10938133›Full record

ArticleMolecular and cellular biology2000

Associations and interactions between bare lymphocyte syndrome factors.

A M DeSandro, U M Nagarajan, J M Boss

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 95 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

A M DeSandroDepartment of Microbiology and Immunology, Emory University School of Medicine, Atlanta, Georgia 30322, USA.
U M Nagarajan
J M Boss
Emory University · US

Funding

MHC Class II Transactivator Function and RegulationR01AI034000 · NIAID · EMORY UNIVERSITY · PI BOSS, JEREMY M. · 1993 to 2009
$2.6M
Regulation of the MHC Class II Transactivator CIITAR56AI034000 · NIAID · EMORY UNIVERSITY · PI BOSS, JEREMY M. · 2010 to 2010
$383k
MHC Class II Bare Lymphocyte Syndrome factorsR21AI034000 · NIAID · EMORY UNIVERSITY · PI BOSS, JEREMY M. · 2003 to 2003
$342k
NIAID NIH HHS AI34000NIAID NIH HHS R01 AI034000NIAID NIH HHS R21 AI034000NIAID NIH HHS R56 AI034000
6 · The paper itself

Abstract

The bare lymphocyte syndrome, a severe combined immunodeficiency due to loss of major histocompatibility complex (MHC) class II gene expression, is caused by inherited mutations in the genes encoding the heterotrimeric transcription factor RFX (RFX-B, RFX5, and RFXAP) and the class II transactivator CIITA. Mutagenesis of the RFX genes was performed, and the properties of the proteins were analyzed with regard to transactivation, DNA binding, and protein-protein interactions. The results identified specific domains within each of the three RFX subunits that were necessary for RFX complex formation, including the ankyrin repeats of RFX-B. DNA binding was dependent on RFX complex formation, and transactivation was dependent on a region of RFX5. RFX5 was found to interact with CIITA, and this interaction was dependent on a proline-rich domain within RFX5. Thus, these studies have defined the protein domains required for the functional regulation of MHC class II genes.

Indexed as

Nuclear ProteinsAnimalsAnkyrinsCell LineCOS CellsDNADNA-Binding ProteinsFlow CytometryGenes, MHC Class IIGenes, ReporterGlutathione TransferaseHumansMutagenesisPlasmidsPrecipitin TestsProlineAnkyrinsDNADNA-Binding ProteinsGlutathione TransferaseMHC class II transactivator proteinNuclear ProteinsProlineRecombinant Fusion ProteinsRegulatory Factor X Transcription FactorsRFX5 protein, humanRFXANK protein, humanRFXAP protein, humanTrans-ActivatorsTranscription Factors

Identifiers

PMID10938133
PMCPMC86141
OpenAlexW2103653288

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.