Evidence map›Paper›PMID 10938121›Full record

ArticleMolecular and cellular biology2000

Cell cycle-dependent binding of yeast heat shock factor to nucleosomes.

C B Venturi, A M Erkine, D S Gross

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

C B VenturiDepartment of Biochemistry and Molecular Biology, Louisiana State University Health Sciences Center, Shreveport, Louisiana 71130, USA.
A M Erkine
D S Gross
Louisiana State University Health Sciences Center New Orleans · US

Funding

STRUCTURE/REGULATION OF THE YEAST HSP90 GENESR01GM045842 · NIGMS · LOUISIANA STATE UNIV HSC SHREVEPORT · PI GROSS, DAVID S. · 1991 to 2000
$162k
NIGMS NIH HHS GM45842NIGMS NIH HHS R01 GM045842
6 · The paper itself

Abstract

In the nucleus, transcription factors must contend with the presence of chromatin in order to gain access to their cognate regulatory sequences. As most nuclear DNA is assembled into nucleosomes, activators must either invade a stable, preassembled nucleosome or preempt the formation of nucleosomes on newly replicated DNA, which is transiently free of histones. We have investigated the mechanism by which heat shock factor (HSF) binds to target nucleosomal heat shock elements (HSEs), using as our model a dinucleosomal heat shock promoter (hsp82-DeltaHSE1). We find that activated HSF cannot bind a stable, sequence-positioned nucleosome in G(1)-arrested cells. It can do so readily, however, following release from G(1) arrest or after the imposition of either an early S- or late G(2)-phase arrest. Surprisingly, despite the S-phase requirement, HSF nucleosomal binding activity is restored in the absence of hsp82 replication. These results contrast with the prevailing paradigm for activator-nucleosome interactions and implicate a nonreplicative, S-phase-specific event as a prerequisite for HSF binding to nucleosomal sites in vivo.

Indexed as

Cell CycleSaccharomyces cerevisiae ProteinsAllelesBlotting, NorthernBlotting, SouthernBlotting, WesternCell NucleusChromatinDNA-Binding ProteinsDNA Restriction EnzymesG1 PhaseGalactoseHeat-Shock ProteinsModels, GeneticNucleosomesPlasmidsChromatindimethyl sulfateDNA-Binding ProteinsDNA Restriction EnzymesGalactoseHeat-Shock ProteinsHSF1 protein, S cerevisiaeNucleosomesSaccharomyces cerevisiae ProteinsSulfuric Acid EstersTranscription Factors

Identifiers

PMID10938121
PMCPMC86119
OpenAlexW2118314073

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.