Evidence map›Paper›PMID 10935489›Full record

ArticleNeoplasia (New York, N.Y.)1999

Disruption of imprinted genes at chromosome region 11p15.5 in paediatric rhabdomyosarcoma.

J Anderson, A Gordon, A McManus, J Shipley, K Pritchard-Jones

Open access · goldAbstract read
In one paragraph

Article in Neoplasia (New York, N.Y.), 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 99 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Long noncoding RNA (lncRNA)Genes & diseases · 2023
    Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. A Step Forward in Realizing the Promise of Genomic Medicine for Childhood Rhabdomyosarcoma.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2021
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Iron, Oxidative Damage and Ferroptosis in Rhabdomyosarcoma.International journal of molecular sciences · 2017
    Review
  16. Article
  17. Article
  18. Article
  19. Uncovering metabolism in rhabdomyosarcoma.Cell cycle (Georgetown, Tex.) · 2016
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

J AndersonSection of Paediatric Oncology, Institute of Cancer Research, Sutton, Surrey, UK. j.anderson@ich.ucl.ac.uk
A Gordon
A McManus
J Shipley
K Pritchard-Jones
Institute of Cancer Research · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rhabdomyosarcomas are characterized by loss of heterozygosity (LOH) at chromosome region 11p15.5, a region known to contain several imprinted genes including insulin-like growth factor 2 (IGF2), H19, and p57(KIP2). We analyzed 48 primary tumour samples and found distinct genetic changes at 11p15.5 in alveolar and embryonal histological subtypes. LOH was a feature of embryonal tumours, but at a lower frequency than previous studies. Loss of imprinting (LOI) of the IGF2 gene was detected in 6 of 13 informative cases, all harbouring PAX3-FKHR or PAX7-FKHR fusion genes characteristic of alveolar histology. In contrast, H19 imprinting was maintained in 14 of 15 informative cases and the case with H19 LOI had maintenance of the IGF2 imprint indicating separate mechanisms controlling imprinting of IGF2 and H19. The adult promoter of IGF2, P1, was used in 5 of 14 tumours and its expression was unrelated to IGF2 imprinting status implying a further mechanism of altered IGF2 regulation. The putative tumour suppressor gene p57(KIP2) was expressed in 15 of 29 tumours and expression was unrelated to allele status. Moreover, in tumours with p57(KIP2) expression, there was no evidence for inactivating mutations, suggesting that p57(KIP2) is not a tumour suppressor in rhabdomyosarcoma.

Indexed as

Chromosomes, Human, Pair 11Genomic ImprintingMutationRNA, UntranslatedAdultAllelesChildCyclin-Dependent Kinase Inhibitor p57DNA-Binding ProteinsDNA, ComplementaryForkhead Box Protein O1Forkhead Transcription FactorsHomeodomain ProteinsHumansInsulin-Like Growth Factor IILoss of HeterozygosityCDKN1C protein, humanCyclin-Dependent Kinase Inhibitor p57DNA-Binding ProteinsDNA, ComplementaryForkhead Box Protein O1Forkhead Transcription FactorsFOXO1 protein, humanH19 long non-coding RNAHomeodomain ProteinsInsulin-Like Growth Factor IIMuscle ProteinsNuclear ProteinsPaired Box Transcription FactorsPAX3 protein, humanPax3 protein, mousePAX3 Transcription FactorPAX7 protein, humanPAX7 Transcription FactorRNA, Long NoncodingRNA, UntranslatedTranscription Factors

Identifiers

PMID10935489
PMCPMC1508094
OpenAlexW2058806041

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.