Evidence map›Paper›PMID 10931938›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2000

A gene encoding a sphingolipid biosynthesis enzyme determines the sensitivity of Saccharomyces cerevisiae to an antifungal plant defensin from dahlia (Dahlia merckii).

K Thevissen, B P Cammue, K Lemaire, J Winderickx, R C Dickson, R L Lester, K K Ferket, F Van Even, A H Parret, W F Broekaert

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
6.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 182 citations in OpenAlex.

  1. Review
  2. Article
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  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Membrane-Interacting Antifungal Peptides.Frontiers in cell and developmental biology · 2021
    Review
  12. Article
  13. International journal of molecular sciences · 2020
    Article
  14. Article
  15. Article
  16. Article
  17. Screening theAntimicrobial agents and chemotherapy · 2019
    Article
  18. Review
  19. Review
  20. Article

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

K ThevissenF. A. Janssens Laboratory of Genetics, Katholieke Universiteit Leuven, Belgium.
B P Cammue
K Lemaire
J Winderickx
R C Dickson
R L Lester
K K Ferket
F Van Even
A H Parret
W F Broekaert
University of Kentucky · USKU Leuven · BE

Funding

MOLECULAR GENETIC ANALYSIS OF YEAST SPHINGOLIPIDSR01GM041302 · NIGMS · UNIVERSITY OF KENTUCKY · PI DICKSON, ROBERT C · 1989 to 2005
$1.9M
NIGMS NIH HHS R01 GM041302
6 · The paper itself

Abstract

We have previously identified a Saccharomyces cerevisiae mutant that is markedly more resistant than wild-type to Dahlia merckii antimicrobial peptide 1 (DmAMP1), an antifungal plant defensin isolated from seeds of dahlia (Dahlia merckii). A complementation approach was followed that consisted of the introduction of a genomic library of DmAMP1-sensitive wild-type yeast into the DmAMP1-resistant yeast mutant and screening for restored sensitivity to DmAMP1. The gene determining sensitivity of S. cerevisiae to DmAMP1 was identified as IPT1, a gene encoding an enzyme involved in the last step of the synthesis of the sphingolipid mannose-(inositol-phosphate)(2)-ceramide. Strains with a nonfunctional IPT1 allele lacked mannose-(inositol-phosphate)(2)-ceramide in their plasma membranes, bound significantly less DmAMP1 compared with wild-type strains, and were highly resistant to DmAMP1-mediated membrane permeabilization. All of these phenotypic deviations could be restored by reintroduction of a functional IPT1 gene. Our data support a model in which membrane patches containing sphingolipids act as binding sites for DmAMP1 or, alternatively, are required to anchor membrane or cell wall-associated proteins, which themselves interact with DmAMP1.

Indexed as

DefensinsSaccharomyces cerevisiae ProteinsAllelesAntifungal AgentsAsteraceaeBinding SitesCell DivisionCell MembraneCell Membrane PermeabilityCloning, MolecularGenes, FungalGenetic Complementation TestMicrobial Sensitivity TestsMutationPhosphotransferases (Alcohol Group Acceptor)Plant ProteinsAntifungal AgentsDefensinsDm-AMP1 protein, Dahlia merckiiIPT1 protein, S cerevisiaePhosphotransferases (Alcohol Group Acceptor)Plant ProteinsSaccharomyces cerevisiae ProteinsSphingolipids

Identifiers

PMID10931938
PMCPMC16899
OpenAlexW1984788848

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.