Evidence map›Paper›PMID 10931859›Full record

ArticleThe Journal of cell biology2000

Visualization of tRNA movements on the Escherichia coli 70S ribosome during the elongation cycle.

R K Agrawal, C M Spahn, P Penczek, R A Grassucci, K H Nierhaus, J Frank

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The Journal of cell biology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
7.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 149 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Joachim Frank's Binding with the Ribosome.Structure (London, England : 1993) · 2019
    Review
  6. Article
  7. Article
  8. Article
  9. The ribosome and its role in protein folding: looking through a magnifying glass.Acta crystallographica. Section D, Structural biology · 2017
    Review
  10. Article
  11. The translation elongation cycle-capturing multiple states by cryo-electron microscopy.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Review
  12. Ribosome Mechanics Informs about Mechanism.Journal of molecular biology · 2016
    Review
  13. Article
  14. Article
  15. Article
  16. Eukaryotic rpL10 drives ribosomal rotation.Nucleic acids research · 2014
    Article
  17. Structural aspects of mitochondrial translational apparatus.Current opinion in structural biology · 2012
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

R K AgrawalWadsworth Center, Department of Biomedical Sciences, State University of New York, Albany, New York 12201, USA.
C M Spahn
P Penczek
R A Grassucci
K H Nierhaus
J Frank
Wadsworth Center · USMax Planck Institute for Molecular Genetics · DE

Funding

Time-resolved Cryo-EM of Short-lived States in Eukaryotic TranslationR01GM055440 · NIGMS · WADSWORTH CENTER · PI FRANK, JOACHIM · 1997 to 2020
$5.1M
STRUCTURAL ANALYSIS OF MACROMOLECULAR ASSEMBLYR37GM029169 · NIGMS · WADSWORTH CENTER · PI FRANK, JOACHIM · 1997 to 2006
$2.8M
NIGMS NIH HHS 1R37 GM 29169NIGMS NIH HHS 1RO1 GM 55440NIGMS NIH HHS R01 GM055440NIGMS NIH HHS R37 GM029169
6 · The paper itself

Abstract

Three-dimensional cryomaps have been reconstructed for tRNA-ribosome complexes in pre- and posttranslocational states at 17-A resolution. The positions of tRNAs in the A and P sites in the pretranslocational complexes and in the P and E sites in the posttranslocational complexes have been determined. Of these, the P-site tRNA position is the same as seen earlier in the initiation-like fMet-tRNA(f)(Met)-ribosome complex, where it was visualized with high accuracy. Now, the positions of the A- and E-site tRNAs are determined with similar accuracy. The positions of the CCA end of the tRNAs at the A site are different before and after peptide bond formation. The relative positions of anticodons of P- and E-site tRNAs in the posttranslocational state are such that a codon-anticodon interaction at the E site appears feasible.

Indexed as

Peptide Chain Elongation, TranslationalCryoelectron MicroscopyCrystallography, X-RayEscherichia coliImage Processing, Computer-AssistedModels, MolecularMovementRibosomesRNA, TransferRNA, Transfer

Identifiers

PMID10931859
PMCPMC2175196
OpenAlexW2116458567

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.