Evidence map›Paper›PMID 10921935›Full record

ArticleJournal of clinical microbiology2000

Rapid identification of Candida dubliniensis using a species-specific molecular beacon.

S Park, M Wong, S A Marras, E W Cross, T E Kiehn, V Chaturvedi, S Tyagi, D S Perlin

Open access · bronzeAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
5.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 79 citations in OpenAlex.

  1. Detection ofJournal of medical microbiology · 2018
    Article
  2. Review
  3. Molecular beacons: a novel optical diagnostic tool.Archivum immunologiae et therapiae experimentalis · 2013
    Review
  4. A simple and reliable PCR-restriction fragment length polymorphism assay to identify Candida albicans and its closely related Candida dubliniensis.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2012
    Article
  5. Molecular beacons in diagnostics.F1000 medicine reports · 2012
    Article
  6. Article
  7. Article
  8. Molecular beacons in biomedical detection and clinical diagnosis.International journal of clinical and experimental pathology · 2008
    Article
  9. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

S ParkPublic Health Research Institute, New York, NY 10016, USA.
M Wong
S A Marras
E W Cross
T E Kiehn
V Chaturvedi
S Tyagi
D S Perlin
Memorial Sloan Kettering Cancer Center · USWadsworth Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Candida dubliniensis is an opportunistic fungal pathogen that has been linked to oral candidiasis in AIDS patients, although it has recently been isolated from other body sites. DNA sequence analysis of the internal transcribed spacer 2 (ITS2) region of rRNA genes from reference Candida strains was used to develop molecular beacon probes for rapid, high-fidelity identification of C. dubliniensis as well as C. albicans. Molecular beacons are small nucleic acid hairpin probes that brightly fluoresce when they are bound to their targets and have a significant advantage over conventional nucleic acid probes because they exhibit a higher degree of specificity with better signal-to-noise ratios. When applied to an unknown collection of 23 strains that largely contained C. albicans and a smaller amount of C. dubliniensis, the species-specific probes were 100% accurate in identifying both species following PCR amplification of the ITS2 region. The results obtained with the molecular beacons were independently verified by random amplified polymorphic DNA analysis-based genotyping and by restriction enzyme analysis with enzymes BsmAI and NspBII, which cleave recognition sequences within the ITS2 regions of C. dubliniensis and C. albicans, respectively. Molecular beacons are promising new probes for the rapid detection of Candida species.

Indexed as

Molecular ProbesCandidaCandida albicansCandidiasisDNA Restriction EnzymesFluorescent DyesHumansMolecular BiologyPolymerase Chain ReactionRandom Amplified Polymorphic DNA TechniqueSensitivity and SpecificitySpecies SpecificityDNA Restriction EnzymesFluorescent DyesMolecular Probes

Identifiers

PMID10921935
PMCPMC87122
OpenAlexW2146557207

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.