Evidence map›Paper›PMID 10919786›Full record

ArticleApplied and environmental microbiology2000

A genomic sample sequence of the entomopathogenic bacterium Photorhabdus luminescens W14: potential implications for virulence.

R H Ffrench-Constant, N Waterfield, V Burland, N T Perna, P J Daborn, D Bowen, F R Blattner

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Article in Applied and environmental microbiology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
13.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 92 citations in OpenAlex.

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  9. Structure of a Tc holotoxin pore provides insights into the translocation mechanism.Proceedings of the National Academy of Sciences of the United States of America · 2019
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  10. Review
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  15. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

R H Ffrench-ConstantDepartment of Biology and Biochemistry, University of Bath, United Kingdom. bssrfc@bath.ac.uk
N Waterfield
V Burland
N T Perna
P J Daborn
D Bowen
F R Blattner
Laboratory of Molecular Genetics · PLUniversity of Bath · GBUniversity of Wisconsin–Madison · US

Funding

Wellcome Trust
6 · The paper itself

Abstract

Photorhabdus luminescens is a pathogenic bacterium that lives in the guts of insect-pathogenic nematodes. After invasion of an insect host by a nematode, bacteria are released from the nematode gut and help kill the insect, in which both the bacteria and the nematodes subsequently replicate. However, the bacterial virulence factors associated with this "symbiosis of pathogens" remain largely obscure. In order to identify genes encoding potential virulence factors, we performed approximately 2,000 random sequencing reads from a P. luminescens W14 genomic library. We then compared the sequences obtained to sequences in existing gene databases and to the Escherichia coli K-12 genome sequence. Here we describe the different classes of potential virulence factors found. These factors include genes that putatively encode Tc insecticidal toxin complexes, Rtx-like toxins, proteases and lipases, colicin and pyocins, and various antibiotics. They also include a diverse array of secretion (e.g., type III), iron uptake, and lipopolysaccharide production systems. We speculate on the potential functions of each of these gene classes in insect infection and also examine the extent to which the invertebrate pathogen P. luminescens shares potential antivertebrate virulence factors. The implications for understanding both the biology of this insect pathogen and links between the evolution of vertebrate virulence factors and the evolution of invertebrate virulence factors are discussed.

Indexed as

Genome, BacterialAnimalsBacterial AdhesionBacterial ProteinsBacterial ToxinsEscherichia coliExtrachromosomal InheritanceGenomic LibraryInsectaIronMolecular Sequence DataNematodaPhotorhabdusPolysaccharides, BacterialSequence Analysis, DNASymbiosisBacterial ProteinsBacterial ToxinsIronPolysaccharides, Bacterial

Identifiers

PMID10919786
PMCPMC92150
OpenAlexW2124411142

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.