Evidence map›Paper›PMID 10908678›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2000

A new role for a SNARE protein as a regulator of the Ypt7/Rab-dependent stage of docking.

C Ungermann, A Price, W Wickner

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
  2. Membrane Fusion and SNAREs: Interaction with Ras Proteins.International journal of molecular sciences · 2022
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Rab proteins and the compartmentalization of the endosomal system.Cold Spring Harbor perspectives in biology · 2014
    Review
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. DNA watermarks: a proof of concept.BMC molecular biology · 2008
    Article
  16. Excess vacuolar SNAREs drive lysis and Rab bypass fusion.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

C UngermannBiochemie-Zentrum Heidelberg, Im Neuenheimer Feld 328, 3.OG, 69120 Heidelberg, Germany. cu2@ix.urz.uni-heidelberg.de
A Price
W Wickner

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The homotypic fusion of yeast vacuoles occurs in an ordered cascade of priming, docking, and fusion. The linkage between these steps has so far remained unclear. We now report that Vam7p (the vacuolar SNAP-23/25 homolog) signals from the cis-SNARE complex to Ypt7p (the vacuolar Rab/Ypt) to initiate the docking process. After Vam7p has been released from the cis-SNARE complex by Sec18p-mediated priming, it is still required for Ypt7p-dependent docking and it needs Ypt7p to remain on the vacuole. Thus, after priming, Vam7p is released from the vacuole altogether if Ypt7p has been extracted by Gdi1p or inactivated by antibody but is not released if docking is blocked simply by vacuole dilution; it is therefore Ypt7p function, and not docking per se, that retains Vam7p. In accord with this finding, cells deleted for the gene encoding Ypt7 have normal amounts of Vam7p but have little Vam7p on their isolated vacuoles. Interaction of Vam7p and Ypt7p is further indicated by two-hybrid analysis [Uetz, P., Giot, L., Cagney, G., Mansfield, T. A., Judson, R. S., Knight, J. R., Lockshon, D., Narayan, V., Srinivasan, M., Pochart, P., et al. (2000) Nature (London) 403, 623-627] and by the effect of Vam7p on the association of the Rab/Ypt-effector HOPS complex (homotypic fusion and vacuole protein sorting; Vam2p and Vam6p plus four vacuole protein sorting class C proteins) with Ypt7p. Vam7p provides a functional link between the priming step, which releases it from the cis-SNARE complex, and docking.

Indexed as

Saccharomyces cerevisiae ProteinsVesicular Transport ProteinsMembrane ProteinsProtein Bindingrab GTP-Binding ProteinsSaccharomyces cerevisiaeSNARE ProteinsVacuolesMembrane Proteinsrab GTP-Binding ProteinsSaccharomyces cerevisiae ProteinsSNARE ProteinsVesicular Transport ProteinsYPT7 protein, S cerevisiae

Identifiers

PMID10908678
PMCPMC16791
OpenAlexW2070593103

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.