Evidence map›Paper›PMID 10908353›Full record

ArticleNucleic acids research2000

Universal bases for hybridization, replication and chain termination.

M Berger, Y Wu, A K Ogawa, D L McMinn, P G Schultz, F E Romesberg

Abstract read
In one paragraph

Article in Nucleic acids research, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Evolving a polymerase for hydrophobic base analogues.Journal of the American Chemical Society · 2009
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

M BergerDepartment of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.
Y Wu
A K Ogawa
D L McMinn
P G Schultz
F E Romesberg

Funding

EXPANDING THE GENETIC ALPHABET BY POLYMERASE EVOLUTIONR01GM060005 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI ROMESBERG, FLOYD E. · 1999 to 2015
$4.6M
EXPANSION OF GENETIC ALPHABET VIA PROTEIN ENGINEERINGF32GM019833 · NIGMS · SCRIPPS RESEARCH INSTITUTE · PI OGAWA, ANTHONY K · 1999 to 2000
$14k
NIGMS NIH HHS F32 GM019833NIGMS NIH HHS F32 GM19833-01NIGMS NIH HHS GM 60005NIGMS NIH HHS R01 GM060005
6 · The paper itself

Abstract

Several unnatural, predominantly hydrophobic nucleobases that pack efficiently in duplex DNA without hydrogen bonding functionalities are reported to circumvent the hydrogen bonding-based specificity, both during oligonucleotide hybridization and enzymatic DNA synthesis. The reported nucleoside analogs are efficient 'universal bases' for hybridization, template directed DNA synthesis and chain termination. Moreover, several of the universal bases function in their biological role, hybridization or replication, with an efficiency not significantly reduced relative to their natural counterparts.

Indexed as

DNA ReplicationNucleic Acid HybridizationNucleosidesBase PairingDeoxyadenine NucleotidesDeoxycytosine NucleotidesDNADNA-Directed DNA PolymeraseDrug StabilityHot TemperatureHydrogen BondingIsoquinolinesMethylationOligonucleotidesSubstrate SpecificityTemplates, Genetic2'-deoxyadenosine triphosphate2'-deoxycytidine 5'-triphosphateDeoxyadenine NucleotidesDeoxycytosine NucleotidesDNADNA-Directed DNA PolymeraseisocarbostyrilIsoquinolinesNucleosidesOligonucleotidesthymidine 5'-triphosphateThymine Nucleotides

Identifiers

PMID10908353
PMCPMC102677

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.