Evidence map›Paper›PMID 10908348›Full record

ArticleNucleic acids research2000

An elongation factor-associating domain is inserted into human cysteinyl-tRNA synthetase by alternative splicing.

J E Kim, K H Kim, S W Lee, W Seol, K Shiba, S Kim

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
  2. Aminoacyl-tRNA synthetases as therapeutic targets.Nature reviews. Drug discovery · 2019
    Review
  3. Review
  4. A Flexible System for Cultivation ofArchaea (Vancouver, B.C.) · 2017
    Article
  5. Article
  6. Architecture and metamorphosis.Topics in current chemistry · 2014
    Review
  7. Structural context for mobilization of a human tRNA synthetase from its cytoplasmic complex.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. tRNA synthetase: tRNA aminoacylation and beyond.Wiley interdisciplinary reviews. RNA
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

J E KimNational Creative Research Initiatives Center for ARS Network, Sung Kyun Kwan University, 300 Chunchun-Dong, Changan-Ku, Suwon-Si, Kyunggi-Do 440-746, Korea.
K H Kim
S W Lee
W Seol
K Shiba
S Kim
Creative Research · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The amino acid sequence of human cytoplasmic cysteinyl-tRNA synthetase (CRS) was examined by analyzing sequences of genomic and expressed sequence tag fragments. From theses analyses, a few interesting possibilities were suggested for the structure of human CRS. First, different isoforms of CRS may result from alternative splicing. Second, the largest one would comprise 831 amino acids. Third, a new exon was identified encoding an 83 amino acid domain that is homologous to parts of elongation factor-1 subunits as well as other proteins involved in protein synthesis. Northern blot analysis showed three different mRNAs for CRS (of approximately 3.0, 2.7 and 2.0 kb) from human testis while only the 2.7 kb mRNA was commonly detected in other tissues. Expression of the exon 2-containing transcript in testis was confirmed by RT-PCR and northern blotting. CRS containing the exon 2-encoded peptide retained catalytic activity comparable to that lacking this peptide. This peptide was responsible for the specific interaction of CRS with elongation factor-1gamma.

Indexed as

Alternative SplicingAcylationAmino Acid SequenceAmino Acyl-tRNA SynthetasesBinding SitesBlotting, NorthernExonsHumansMaleMolecular Sequence DataPeptide Elongation Factor 1Peptide Elongation FactorsReverse Transcriptase Polymerase Chain ReactionRNA, MessengerSequence AlignmentTestisAmino Acyl-tRNA Synthetasescysteinyl-tRNA synthetasePeptide Elongation Factor 1Peptide Elongation FactorsRNA, Messenger

Identifiers

PMID10908348
PMCPMC102683
OpenAlexW2097789452

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.