Evidence map›Paper›PMID 10891964›Full record

ArticleJAMA2000

Mapping of a gene for severe pediatric gastroesophageal reflux to chromosome 13q14.

F Z Hu, R A Preston, J C Post, G J White, L W Kikuchi, X Wang, S M Leal, M A Levenstien, J Ott, T W Self and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in JAMA, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
11.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 107 citations in OpenAlex.

  1. Highlighted role of "IL17 signaling pathway" in gastroesophageal reflux disease.Gastroenterology and hepatology from bed to bench · 2020
    Article
  2. Article
  3. Article
  4. Article
  5. Molecular pathways and genetic factors in the pathogenesis of laryngopharyngeal reflux.European archives of oto-rhino-laryngology : official journal of the European Federation of Oto-Rhino-Laryngological Societies (EUFOS) : affiliated with the German Society for Oto-Rhino-Laryngology - Head and Neck Surgery · 2009
    Review
  6. GERD or not GERD: the fussy infant.Journal of perinatology : official journal of the California Perinatal Association · 2009
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. The genetics of otitis media.Current allergy and asthma reports · 2002
    Review
  15. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 1 institution in 1 country.

F Z HuCenter for Genomic Sciences, Room 1030, Allegheny General Hospital, 320 E North Ave, Pittsburgh, PA 15212, USA.
R A Preston
J C Post
G J White
L W Kikuchi
X Wang
S M Leal
M A Levenstien
J Ott
T W Self
G Allen
R S Stiffler
C McGraw
E A Pulsifer-Anderson
G D Ehrlich
Allegheny General Hospital · US

Funding

Identification of Nonsyndromic Hearing Impairment GenesR01DC003594 · NIDCD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SUZANNE M LEAL · 2004 to 2026
$7.7M
MOLECULAR ANALYSIS OF PATHOGENS IN OTITIS MEDIA BY PCRR01DC002148 · NIDCD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI EHRLICH, GARTH D. · 1994 to 2017
$6.5M
MOLECULAR GENETICS OF A SYNDROME WITH HEARING IMPAIRMENTR01DC002398 · NIDCD · ALLEGHENY-SINGER RESEARCH INSTITUTE · PI POST, JAMES CHRISTOPHER · 2000 to 2004
$1.6M
GENETICS OF SEVERE PEDIATRIC GASTROESOPHAGEAL REFLUXR01DC004591 · NIDCD · ALLEGHENY-SINGER RESEARCH INSTITUTE · PI EHRLICH, GARTH D. · 2000 to 2003
$1.4M
LINKAGE ANALYSIS METHODS FOR HUMAN GENE MAPPINGR01HG000008 · NHGRI · ROCKEFELLER UNIVERSITY · PI OTT, JURG · 1990 to 2004
$1.2M
GENETIC MAPPING OF A SYNDROME WITH HEARING IMPAIRMENTR29DC002398 · NIDCD · CHILDREN'S HOSP PITTSBURGH/UPMC HLTH SYS · PI POST, JAMES CHRISTOPHER · 1994 to 1998
–
NHGRI NIH HHS R01 HG000008NIDCD NIH HHS DC02148NIDCD NIH HHS DC02398NIDCD NIH HHS DC04591NIDCD NIH HHS R01 DC002148NIDCD NIH HHS R01 DC002398NIDCD NIH HHS R01 DC003594NIDCD NIH HHS R01 DC004591NIDCD NIH HHS R29 DC002398
6 · The paper itself

Abstract

contextGastroesophageal reflux (GER) has not previously been widely regarded as a hereditary disease. A few reports have suggested, however, that a genetic component may contribute to the incidence of GER, especially in its severe or chronic forms.

objectiveTo identify a genetic locus that cosegregates with a severe pediatric GER phenotype in families with multiple affected members.

designA genome-wide scan of families affected by severe pediatric GER using polymorphic microsatellite markers spaced at an average of 8 centimorgans (cM), followed by haplotyping and by pairwise and multipoint linkage analyses.

settingGeneral US community, with research performed in a university tertiary care hospital. SUBJECTS: Affected and unaffected family members from 5 families having multiple individuals affected by severe pediatric GER, identified through a patient support group.

main outcome measuresDetermination of inheritance patterns and linkage of a genetic locus with the severe pediatric GER phenotype by logarithm-of-odds (lod) score analysis, considering a lod score of 3 or greater as evidence of linkage.

resultsIn these families, severe pediatric GER followed an autosomal dominant hereditary pattern with high penetrance. A gene for severe pediatric GER was mapped to a 13-cM region on chromosome 13q between microsatellite markers D13S171 and D13S263. A maximum multifamily 2-point lod score of 5.58 and a maximum multifamily multipoint lod score of 7.15 were obtained for marker D13S1253 at map position 35 cM when presumptively affected persons were modeled as unknown (a maximum multipoint score of 4.88 was obtained when presumptively affected persons were modeled as unaffected).

conclusionThese data suggest that a gene for severe pediatric GER maps to chromosome 13q14. JAMA. 2000;284:325-334

Indexed as

Chromosomes, Human, Pair 13ChildGastroesophageal RefluxGenetic LinkageGenotypeHaplotypesHumansMicrosatellite RepeatsPedigreePhenotype

Identifiers

PMID10891964
PMCPMC6148744
OpenAlexW2139031591

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.