Evidence map›Paper›PMID 10891484›Full record

ArticleMolecular and cellular biology2000

Specific structural motifs determine TRAP220 interactions with nuclear hormone receptors.

Y Ren, E Behre, Z Ren, J Zhang, Q Wang, J D Fondell

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 115 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. What do Transcription Factors Interact With?Journal of molecular biology · 2021
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Mediator-dependent nuclear receptor function.Seminars in cell & developmental biology · 2011
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Y RenDepartment of Physiology, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA.
E Behre
Z Ren
J Zhang
Q Wang
J D Fondell
University of Maryland, Baltimore · USArqule (United States) · US

Funding

TRANSCRIPTION COFACTORS OF THE THYROID HORMONE RECEPTORR01DK054030 · NIDDK · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI FONDELL, JOSEPH D · 1999 to 2007
$1.8M
NIDDK NIH HHS DK54030-02NIDDK NIH HHS R01 DK054030
6 · The paper itself

Abstract

The TRAP coactivator complex is a large, multisubunit complex of nuclear proteins which associates with nuclear hormone receptors (NRs) in the presence of cognate ligand and stimulates NR-mediated transcription. A single subunit, TRAP220, is thought to target the entire complex to a liganded receptor through a domain containing two of the signature LXXLL motifs shown previously in other types of coactivator proteins to be essential for mediating NR binding. In this work, we demonstrate that each of the two LXXLL-containing regions, termed receptor binding domains 1 and 2 (RBD-1 and RBD-2), is differentially preferred by specific NRs. The retinoid X receptor (RXR) displays a weak yet specific activation function 2 (AF2)-dependent preference for RBD-1, while the thyroid hormone receptor (TR), vitamin D(3) receptor (VDR), and peroxisome proliferator-activated receptor all exhibit a strong AF2-dependent preference for RBD-2. Using site-directed mutagenesis, we show that preference for RBD-2 is due to the presence of basic-polar residues on the amino-terminal end of the core LXXLL motif. Furthermore, we show that the presence and proper spacing of both RBD-1 and RBD-2 are required for an optimal association of TRAP220 with RXR-TR or RXR-VDR heterodimers bound to DNA and for TRAP220 coactivator function. On the basis of these results, we suggest that a single molecule of TRAP220 can interact with both subunits of a DNA-bound NR heterodimer.

Indexed as

Amino Acid MotifsAmino Acid SequenceAnimalsBase SequenceBinding SitesCarrier ProteinsDimerizationFurylfuramideMediator Complex Subunit 1MiceMolecular Sequence DataMutagenesisReceptors, CalcitriolReceptors, Cytoplasmic and NuclearReceptors, Retinoic AcidReceptors, Thyroid HormoneCarrier ProteinsFurylfuramideMed1 protein, mouseMediator Complex Subunit 1Receptors, CalcitriolReceptors, Cytoplasmic and NuclearReceptors, Retinoic AcidReceptors, Thyroid HormoneRetinoid X ReceptorsTranscription Factors

Identifiers

PMID10891484
PMCPMC85995
OpenAlexW2156693006

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.