Evidence map›Paper›PMID 10888666›Full record

ArticleMolecular biology of the cell2000

AtVPS45 complex formation at the trans-Golgi network.

D C Bassham, A A Sanderfoot, V Kovaleva, H Zheng, N V Raikhel

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 157 citations in OpenAlex.

  1. Cargo Sorting Zones in Plant Trans-Golgi Network.Sub-cellular biochemistry · 2026
    Review
  2. Article
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  5. Review
  6. Review
  7. The sorting of cargo proteins in the plantFrontiers in plant science · 2022
    Review
  8. Article
  9. Article
  10. Article
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  14. Review
  15. Article
  16. Functional diversification ofProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  17. Article
  18. Review
  19. Article
  20. Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

D C BasshamMichigan State University-Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824-1312, USA.
A A Sanderfoot
V Kovaleva
H Zheng
N V Raikhel
Michigan State University · US

Funding

ACTPEP12 AND VACUOLAR TARGETINGF32GM018861 · NIGMS · MICHIGAN STATE UNIVERSITY · PI SANDERFOOT, ANTON A · 1997 to 1999
–
NIGMS NIH HHS F32 GM018861NIGMS NIH HHS GM 18861
6 · The paper itself

Abstract

The Sec1p family of proteins are thought to be involved in the regulation of vesicle fusion reactions through interaction with t-SNAREs (target soluble N-ethylmaleimide-sensitive factor attachment protein receptors) at the target membrane. AtVPS45 is a member of this family from Arabidopsis thaliana that we now demonstrate to be present on the trans-Golgi network (TGN), where it colocalizes with the vacuolar cargo receptor AtELP. Unlike yeast Vps45p, AtVPS45 does not interact with, or colocalize with, the prevacuolar t-SNARE AtPEP12. Instead, AtVPS45 interacts with two t-SNAREs, AtTLG2a and AtTLG2b, that show similarity to the yeast t-SNARE Tlg2p. AtTLG2a and -b each colocalize with AtVPS45 at the TGN; however, AtTLG2a is in a different region of the TGN than AtTLG2b by immunogold electron microscopy. Therefore, we propose that complexes containing AtVPS45 and either AtTLG2a or -b define functional subdomains of the TGN and may be required for different trafficking events. Among other Arabidopsis SNAREs, AtVPS45 antibodies preferentially coprecipitate AtVTI1b over the closely related isoform AtVTI1a, implying that AtVTI1a and AtVTI1b also have distinct functions within the cell. These data point to a functional complexity within the plant secretory pathway, where proteins encoded by gene families have specialized functions, rather than functional redundancy.

Indexed as

Arabidopsis ProteinsMembrane Transport ProteinsSaccharomyces cerevisiae ProteinsVesicular Transport ProteinsAnimalsArabidopsisBinding SitesCarrier ProteinsGolgi ApparatusMembrane ProteinsPlant ExtractsPlant RootsQa-SNARE ProteinsQb-SNARE ProteinsRabbitsSNARE ProteinsArabidopsis ProteinsCarrier ProteinsMembrane ProteinsMembrane Transport ProteinsPlant ExtractsQa-SNARE ProteinsQb-SNARE ProteinsSaccharomyces cerevisiae ProteinsSNARE ProteinsTLG2 protein, S cerevisiaeVesicular Transport ProteinsVPS45 protein, ArabidopsisVTI1 protein, S cerevisiae

Identifiers

PMID10888666
PMCPMC14917
OpenAlexW2115611091

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.