Evidence map›Paper›PMID 10880476›Full record

ArticleGenetics2000

dpy-18 encodes an alpha-subunit of prolyl-4-hydroxylase in caenorhabditis elegans.

K L Hill, B D Harfe, C A Dobbins, S W L'Hernault

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 50 citations in OpenAlex.

  1. International journal of molecular sciences · 2026
    Review
  2. Article
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  4. Glia Development and Function in the NematodeCold Spring Harbor perspectives in biology · 2024
    Review
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  6. Article
  7. Article
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  12. Review
  13. Regulation of axonal midline guidance by prolyl 4-hydroxylation in Caenorhabditis elegans.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2014
    Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

K L HillProgram in Genetics and Molecular Biology, Graduate Division of Biological and Biomedical Sciences, Emory University, Atlanta, Georgia 30322, USA.
B D Harfe
C A Dobbins
S W L'Hernault
Emory University · US

Funding

GENETICS OF CAENORHABDITIS ELEGANS SPERM MORPHOGENESISR01GM040697 · NIGMS · EMORY UNIVERSITY · PI L'HERNAULT, STEVEN W. · 1995 to 2003
$951k
NIGMS NIH HHS GM RO1 GM40697
6 · The paper itself

Abstract

Collagen is an extracellular matrix (ECM) component encoded by a large multigene family in multicellular animals. Procollagen is post-translationally modified by prolyl-4-hydroxylase (EC 1.14.11.2) before secretion and participation in ECM formation. Therefore, collagen processing and regulation can be studied by examining this required interaction of prolyl-4-hydroxylase with procollagen. High-resolution polymorphism mapping was used to place the Caenorhabditis elegans dpy-18 gene on the physical map, and we show that it encodes a prolyl-4-hydroxylase alpha catalytic subunit. The Dpy phenotype of dpy-18(e364) amber mutants is more severe when this mutation is in trans to the noncomplementing deficiency tDf7, while the dpy-18(e499) deletion mutant exhibits the same phenotype as dpy-18(e499)/tDf7. Furthermore, dpy-18 RNA interference (RNAi) in wild-type worms results in Dpy progeny, while dpy-18 (RNAi) in dpy-18(e499) mutants does not alter the Dpy phenotype of their progeny. These observations suggest that the dpy-18 null phenotype is Dpy. A dpy-18::gfp promoter fusion construct is expressed throughout the hypodermis within the cells that abundantly produce the cuticle collagens, as well as in certain head and posterior neurons. While prolyl-4-hydroxylase has been studied extensively by biochemical techniques, this is the first report of a mutationally defined prolyl-4-hydroxylase in any animal.

Indexed as

AllelesAlternative SplicingAmino Acid SequenceAnimalsCaenorhabditis elegansCatalytic DomainGene ExpressionGreen Fluorescent ProteinsHelminth ProteinsLuminescent ProteinsMolecular Sequence DataMutationPhenotypePhysical Chromosome MappingPolymorphism, GeneticProcollagen-Proline DioxygenaseGreen Fluorescent ProteinsHelminth ProteinsLuminescent ProteinsProcollagen-Proline DioxygenaseRecombinant Fusion Proteins

Identifiers

PMID10880476
PMCPMC1461137
OpenAlexW2129143861

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.