Evidence map›Paper›PMID 10880473›Full record

ArticleGenetics2000

The cloning and molecular analysis of pawn-B in Paramecium tetraurelia.

W J Haynes, K Y Ling, R R Preston, Y Saimi, C Kung

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Genetics, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 39 citations in OpenAlex.

  1. Review
  2. Frontiers in cell and developmental biology · 2022
    Review
  3. Voltage-gated calcium channels of Paramecium cilia.The Journal of experimental biology · 2016
    Article
  4. Article
  5. Article
  6. Article
  7. Ion channels in microbes.Physiological reviews · 2008
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. An exchanger-like protein underlies the large Mg2+ current in Paramecium.Proceedings of the National Academy of Sciences of the United States of America · 2002
    Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

W J HaynesLaboratory of Molecular Biology, University of Wisconsin, Madison, Wisconsin 53706, USA.
K Y Ling
R R Preston
Y Saimi
C Kung
University of Wisconsin–Madison · USHahnemann University Hospital · US

Funding

MOLECULAR GENETICS OF PARAMECIUMR01GM022714 · NIGMS · UNIVERSITY OF WISCONSIN MADISON · PI KUNG, CHING · 1985 to 2002
$729k
MOLECULAR PHYSIOLOGY OF CALMODULIN-DEPENDENT CHANNELSR01GM036386 · NIGMS · UNIVERSITY OF WISCONSIN MADISON · PI SAIMI, YOSHIRO · 1986 to 1998
–
MAGNESIUM REGULATION OF MEMBRANE FUNCTION IN PARAMECIUMR29GM051498 · NIGMS · MCP HAHNEMANN UNIVERSITY · PI PRESTON, ROBIN · 1995 to 1999
–
NIGMS NIH HHS GM-22714NIGMS NIH HHS GM-36386NIGMS NIH HHS GM-51498
6 · The paper itself

Abstract

Pawn mutants of Paramecium tetraurelia lack a depolarization-activated Ca(2+) current and do not swim backward. Using the method of microinjection and sorting a genomic library, we have cloned a DNA fragment that complements pawn-B (pwB/pwB). The minimal complementing fragment is a 798-bp open reading frame (ORF) that restores the Ca(2+) current and the backward swimming when expressed. This ORF contains a 29-bp intron and is transcribed and translated. The translated product has two putative transmembrane domains but no clear matches in current databases. Mutations in the available pwB alleles were found within this ORF. The d4-95 and d4-96 alleles are single base substitutions, while d4-662 (previously pawn-D) harbors a 44-bp insertion that matches an internal eliminated sequence (IES) found in the wild-type germline DNA except for a single C-to-T transition. Northern hybridizations and RT-PCR indicate that d4-662 transcripts are rapidly degraded or not produced. A second 155-bp IES in the wild-type germline ORF excises at two alternative sites spanning three asparagine codons. The pwB ORF appears to be separated from a 5' neighboring ORF by only 36 bp. The close proximity of the two ORFs and the location of the pwB protein as indicated by GFP-fusion constructs are discussed.

Indexed as

AnimalsBase SequenceBlotting, NorthernCalciumCalcium ChannelsCloning, MolecularGene ExpressionGenetic Complementation TestGreen Fluorescent ProteinsLuminescent ProteinsMembrane ProteinsMicroinjectionsMutationOpen Reading FramesParamecium tetraureliaProtozoan ProteinsCalciumCalcium ChannelsGreen Fluorescent ProteinsLuminescent ProteinsMembrane Proteinspawn-B protein, Paramecium tetraureliaProtozoan ProteinsRecombinant Fusion Proteins

Identifiers

PMID10880473
PMCPMC1461171
OpenAlexW2096369882

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.