Evidence map›Paper›PMID 10878080›Full record

ArticleJournal of clinical microbiology2000

Rapid differentiation of Borrelia garinii from Borrelia afzelii and Borrelia burgdorferi sensu stricto by LightCycler fluorescence melting curve analysis of a PCR product of the recA gene.

J Pietilä, Q He, J Oksi, M K Viljanen

Abstract read
In one paragraph

Article in Journal of clinical microbiology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
  2. Complete mitochondrial genome of Asian longhorned tick,Mitochondrial DNA. Part B, Resources · 2021
    Article
  3. Screening forPathogens (Basel, Switzerland) · 2020
    Article
  4. PeerJ · 2020
    Article
  5. Detection of Eight Respiratory Bacterial Pathogens Based on Multiplex Real-Time PCR with Fluorescence Melting Curve Analysis.The Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2020
    Article
  6. Article
  7. Article
  8. Article
  9. Detection of microbial agents in ticks collected from migratory birds in central Italy.Vector borne and zoonotic diseases (Larchmont, N.Y.) · 2014
    Article
  10. Article
  11. Article
  12. Review
  13. Diagnosis of lyme borreliosis.Clinical microbiology reviews · 2005
    Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

J PietiläNational Public Health Institute, Department in Turku, and Turku Immunology Centre, Turku, Finland.
Q He
J Oksi
M K Viljanen

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To differentiate the Borrelia burgdorferi sensu lato genospecies, LightCycler real-time PCR was used for the fluorescence (SYBR Green I) melting curve analysis of borrelial recA gene PCR products. The specific melting temperature analyzed is a function of the GC/AT ratio, length, and nucleotide sequence of the amplified product. A total of 32 DNA samples were tested. Of them three were isolated from B. burgdorferi reference strains and 16 were isolated from B. burgdorferi strains cultured from Ixodes ricinus ticks; 13 were directly isolated from nine human biopsy specimens and four I. ricinus tick midguts. The melting temperature of B. garinii was 2 degrees C lower than that of B. burgdorferi sensu stricto and B. afzelii. Melting curve analysis offers a rapid alternative for identification and detection of B. burgdorferi sensu lato genospecies.

Indexed as

Borrelia burgdorferiAnimalsBorreliaBorrelia burgdorferi GroupFluorescenceHumansIxodesLyme DiseasePolymerase Chain ReactionRec A RecombinasesTemperatureRec A Recombinases

Identifiers

PMID10878080
PMCPMC87021

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.