Evidence map›Paper›PMID 10873789›Full record

ArticleAmerican journal of human genetics2000

A sensitive denaturing gradient-Gel electrophoresis assay reveals a high frequency of heteroplasmy in hypervariable region 1 of the human mtDNA control region.

L A Tully, T J Parsons, R J Steighner, M M Holland, M A Marino, V L Prenger

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Article in American journal of human genetics, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

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30citing papers in PubMed
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3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

L A TullyUniversity of Maryland, School of Medicine, Division of Human Genetics, Baltimore, MD, USA. lois.tully@gte.net
T J Parsons
R J Steighner
M M Holland
M A Marino
V L Prenger

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A population study of heteroplasmy in the hypervariable region 1 (HV1) portion of the human mtDNA control region was performed. Blood samples from 253 randomly chosen individuals were examined using a sensitive denaturing gradient-gel electrophoresis (DGGE) system. This method is capable of detecting heteroplasmic proportions as low as 1% and virtually all heteroplasmy where the minor component is > or = 5%. Heteroplasmy was observed in 35 individuals (13.8%; 95% confidence interval [CI] 9.6-18.0). Of these individuals, 33 were heteroplasmic at one nucleotide position, whereas 2 were heteroplasmic at two different positions (a condition known as "triplasmy"). Although heteroplasmy occurred at a total of 16 different positions throughout HV1, it was most frequently observed at positions 16093 (n=13) and 16129 (n=6). In addition, the majority of heteroplasmic variants occurred at low proportions and could not be detected by direct sequencing of PCR products. This study indicates that low-level heteroplasmy in HV1 is relatively common and that it occurs at a broad spectrum of sites. Our results corroborate those of other recent reports indicating that heteroplasmy in the control region is more common than was previously believed-a finding that is of potential importance to evolutionary studies and forensic applications that are based on mtDNA variation.

Indexed as

Base SequenceCytoplasmDNA, MitochondrialDNA Mutational AnalysisElectrophoresis, Agar GelEthnicityEvolution, MolecularGenetic VariationHumansLeast-Squares AnalysisMitochondriaMutationNucleic Acid DenaturationNucleic Acid HeteroduplexesPhylogenyPolymerase Chain ReactionDNA, MitochondrialNucleic Acid Heteroduplexes

Identifiers

PMID10873789
PMCPMC1287188

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.