Evidence map›Paper›PMID 10869233›Full record

ArticleAmerican journal of human genetics2000

An optimized set of human telomere clones for studying telomere integrity and architecture.

S J Knight, C M Lese, K S Precht, J Kuc, Y Ning, S Lucas, R Regan, M Brenan, A Nicod, N M Lawrie and 6 more

Abstract read
In one paragraph

Article in American journal of human genetics, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Molecular cytogenetic analysis of telomere rearrangements.Current protocols in human genetics · 2015
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  11. Array-based comparative genomic hybridization in ulcerative colitis neoplasia: single non-dysplastic biopsies distinguish progressors from non-progressors.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2010
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  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

S J KnightInstitute of Molecular Medicine, John Radcliffe Hospital, Oxford OX3 9DS, United Kingdom.
C M Lese
K S Precht
J Kuc
Y Ning
S Lucas
R Regan
M Brenan
A Nicod
N M Lawrie
D L Cardy
H Nguyen
T J Hudson
H C Riethman
D H Ledbetter
J Flint

Funding

CRYPTIC TELOMERE ABNORMALITIES IN MENTAL RETARDATIONR01HD036715 · NICHD · UNIVERSITY OF CHICAGO · PI LEDBETTER, DAVID H. · 1999 to 2002
$543k
MOLECULAR CHARACTERIZATION OF HUMAN TELOMERESF32HG000174 · NHGRI · UNIVERSITY OF CHICAGO · PI MARTIN, CHRISTA LESE · 1997 to 1998
–
NHGRI NIH HHS 1 F32 HG00174-01NHGRI NIH HHS F32 HG000174NICHD NIH HHS 1-R01-HD36715-01Wellcome Trust
6 · The paper itself

Abstract

Telomere-specific clones are a valuable resource for the characterization of chromosomal rearrangements. We previously reported a first-generation set of human telomere probes consisting of 34 genomic clones, which were a known distance from the end of the chromosome ( approximately 300 kb), and 7 clones corresponding to the most distal markers on the integrated genetic/physical map (1p, 5p, 6p, 9p, 12p, 15q, and 20q). Subsequently, this resource has been optimized and completed: the size of the genomic clones has been expanded to a target size of 100-200 kb, which is optimal for use in genome-scanning methodologies, and additional probes for the remaining seven telomeres have been identified. For each clone we give an associated mapped sequence-tagged site and provide distances from the telomere estimated using a combination of fiberFISH, interphase FISH, sequence analysis, and radiation-hybrid mapping. This updated set of telomeric clones is an invaluable resource for clinical diagnosis and represents an important contribution to genetic and physical mapping efforts aimed at telomeric regions.

Indexed as

Chromosomes, Artificial, YeastChromosomes, HumanCloning, MolecularDNA ProbesGenetic MarkersHumansHybrid CellsIn Situ Hybridization, FluorescenceInterphasePhysical Chromosome MappingPolymorphism, GeneticSequence Analysis, DNASequence Tagged SitesTelomereDNA ProbesGenetic Markers

Identifiers

PMID10869233
PMCPMC1287181

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.