Evidence map›Paper›PMID 10859203›Full record

ArticlePlant physiology2000

ACX3, a novel medium-chain acyl-coenzyme A oxidase from Arabidopsis.

B E Froman, P C Edwards, A G Bursch, K Dehesh

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 78 citations in OpenAlex.

  1. Characterization of Acyl-CoA Oxidases from the Lipolytic YeastJournal of microbiology and biotechnology · 2022
    Article
  2. Review
  3. Article
  4. Functional Characterization ofFrontiers in plant science · 2021
    Article
  5. Article
  6. Article
  7. Article
  8. Cellular and Molecular Responses ofFrontiers in microbiology · 2018
    Article
  9. Article
  10. Article
  11. Article
  12. Acyl-lipid metabolism.The arabidopsis book · 2013
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Acyl-lipid metabolism.The arabidopsis book · 2010
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

B E FromanCalgene LLC, Davis, CA 95616, USA. byron.froman@monsanto.com
P C Edwards
A G Bursch
K Dehesh

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In a database search for homologs of acyl-coenzyme A oxidases (ACX) in Arabidopsis, we identified a partial genomic sequence encoding an apparently novel member of this gene family. Using this sequence information we then isolated the corresponding full-length cDNA from etiolated Arabidopsis cotyledons and have characterized the encoded recombinant protein. The polypeptide contains 675 amino acids. The 34 residues at the amino terminus have sequence similarity to the peroxisomal targeting signal 2 of glyoxysomal proteins, including the R-[I/Q/L]-X5-HL-XL-X15-22-C consensus sequence, suggesting a possible microsomal localization. Affinity purification of the encoded recombinant protein expressed in Escherichia coli followed by enzymatic assay, showed that this enzyme is active on C8:0- to C14:0-coenzyme A with maximal activity on C12:0-coenzyme A, indicating that it has medium-chain-specific activity. These data indicate that the protein reported here is different from previously characterized classes of ACX1, ACX2, and short-chain ACX (SACX), both in sequence and substrate chain-length specificity profile. We therefore, designate this new gene AtACX3. The temporal and spatial expression patterns of AtACX3 during development and in various tissues were similar to those of the AtSACX and other genes expressed in glyoxysomes. Currently available database information indicates that AtACX3 is present as a single copy gene.

Indexed as

Arabidopsis ProteinsAcyl-CoA OxidaseAmino Acid SequenceArabidopsisBase SequenceChromosome MappingCloning, MolecularDNA, ComplementaryDNA PrimersEscherichia coliMolecular Sequence DataOxidoreductasesSequence Homology, Amino AcidSubstrate SpecificityACX3 protein, ArabidopsisAcyl-CoA OxidaseArabidopsis ProteinsDNA, ComplementaryDNA PrimersOxidoreductases

Identifiers

PMID10859203
PMCPMC59041
OpenAlexW2124423829

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.