Evidence map›Paper›PMID 10852942›Full record

ArticleThe Plant cell2000

Arabidopsis MutS homologs-AtMSH2, AtMSH3, AtMSH6, and a novel AtMSH7-form three distinct protein heterodimers with different specificities for mismatched DNA.

K M Culligan, J B Hays

Open access · greenAbstract read
In one paragraph

Article in The Plant cell, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 130 citations in OpenAlex.

  1. Review
  2. Article
  3. Accumulation ofFrontiers in plant science · 2025
    Article
  4. Expansion of the MutS Gene Family in Plants.bioRxiv : the preprint server for biology · 2024
    Article
  5. Review
  6. Article
  7. Review
  8. The Barley Chloroplast Mutator (International journal of molecular sciences · 2022
    Article
  9. Review
  10. Article
  11. Review
  12. Genome Maintenance Mechanisms at the Chromatin Level.International journal of molecular sciences · 2021
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

K M CulliganProgram in Molecular and Cellular Biology, Oregon State University, Corvallis, Oregon 97331, USA.
J B Hays
Oregon State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Arabidopsis mismatch repair genes predict MutS-like proteins remarkably similar to eukaryotic MutS homologs-MSH2, MSH3, and MSH6. A novel feature in Arabidopsis is the presence of two MSH6-like proteins, designated AtMSH6 and AtMSH7. Combinations of Arabidopsis AtMSH2 with AtMSH3, AtMSH6, or AtMSH7 proteins-products of in vitro transcription and translation-were analyzed for interactions by analytical gel filtration chromatography. The AtMSH2 protein formed heterodimers with AtMSH3, AtMSH6, and AtMSH7, but no single proteins formed homodimers. The abilities of the various heterodimers to bind to mismatched 51-mer duplexes were measured by electrophoretic mobility-shift assays. Similar to the behavior of the corresponding human proteins, AtMSH2*AtMSH3 heterodimers bound "insertion-deletion" DNA with three nucleotides (+AAG) or one nucleotide (+T) looped out much better than they bound DNA with a base/base mispair (T/G), whereas AtMSH2*AtMSH6 bound the (+T) substrate strongly, (T/G) well, and (+AAG) no better than it did a (T/A) homoduplex. However, AtMSH2*AtMSH7 showed a different specificity: moderate affinity for a (T/G) substrate and weak binding of (+T). Thus, AtMSH2*AtMSH7 may be specialized for lesions/base mispairs not tested or for (T/G) mispairs in special contexts.

Indexed as

Adenosine TriphosphatasesArabidopsis ProteinsDNA-Binding ProteinsEscherichia coli ProteinsAmino Acid SequenceArabidopsisBacterial ProteinsBase Pair MismatchChromatography, GelDimerizationDNA, PlantElectrophoresis, Polyacrylamide GelMolecular Sequence DataMutS DNA Mismatch-Binding ProteinMutS Homolog 2 ProteinMutS Homolog 3 ProteinAdenosine TriphosphatasesArabidopsis ProteinsAT4G02070 protein, ArabidopsisBacterial ProteinsDNA-Binding ProteinsDNA, PlantEscherichia coli ProteinsMSH2 protein, ArabidopsisMSH3 protein, ArabidopsisMSH7 protein, ArabidopsisMutS DNA Mismatch-Binding ProteinMutS Homolog 2 ProteinMutS Homolog 3 ProteinMutS protein, E coliNucleic Acid HeteroduplexesPlant Proteins

Identifiers

PMID10852942
PMCPMC149098
OpenAlexW2063051241

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.