Evidence map›Paper›PMID 10846093›Full record

ArticleJournal of virology2000

Expression of human herpesvirus 6B rep within infected cells and binding of its gene product to the TATA-binding protein in vitro and in vivo.

Y Mori, P Dhepakson, T Shimamoto, K Ueda, Y Gomi, H Tani, Y Matsuura, K Yamanishi

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In one paragraph

Article in Journal of virology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 44 citations in OpenAlex.

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  11. U94 of human herpesvirus 6 inhibits in vitro angiogenesis and lymphangiogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
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  13. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Y MoriDepartment of Microbiology, Osaka University Medical School, Osaka University, Suita, Japan.
P Dhepakson
T Shimamoto
K Ueda
Y Gomi
H Tani
Y Matsuura
K Yamanishi
Osaka University · JPNational Institute of Infectious Diseases · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have characterized the human herpesvirus 6B (HHV-6B) rep gene, which is a homologue of the adeno-associated virus type 2 rep and is unique in the herpesvirus family. Three transcripts, 9.0, 5.0, and 2. 7 kb (the major transcript), were detected by Northern blotting using an HHV-6B rep probe under late conditions. We investigated the expression kinetics of the rep gene using cycloheximide (CHX) and phosphonoformic acid (PFA), which are inhibitors of protein synthesis and viral DNA synthesis, respectively. The 5.2-kb transcript was mainly detected in the absence of protein biosynthesis upon infection, and none of the 9.0-, 5.0-, and 2.7-kb transcripts detected under the late conditions were detected in the presence of CHX and PFA. Sequences obtained from a cDNA library showed that the 5.0- and 2.7-kb transcripts were spliced from two and three exons, respectively, and the 2.7-kb transcript was more abundant. Immunohistochemistry using an antibody raised against the HHV-6 rep gene product (REP) revealed that REP was mainly present in the nucleus of MT-4 cells within 24 h after infection with HHV-6B. Using pull-down assays, coimmunoprecipitation, and a mammalian two hybrid system, we showed that HHV-6 REP binds to a transcription factor, human TATA-binding protein, through its N-terminal region.

Indexed as

Saccharomyces cerevisiae ProteinsAnimalsCell LineCells, CulturedDNA-Binding ProteinsFungal ProteinsGlutathione TransferaseHerpesvirus 6, HumanHumansRecombinant Fusion ProteinsSpodopteraTATA-Box Binding ProteinTranscription FactorsTranscription, GeneticTwo-Hybrid System TechniquesViral Nonstructural ProteinsDNA-Binding ProteinsFungal ProteinsGAL4 protein, S cerevisiaeGlutathione TransferaseRecombinant Fusion ProteinsSaccharomyces cerevisiae ProteinsTATA-Box Binding ProteinTranscription FactorsViral Nonstructural Proteins

Identifiers

PMID10846093
PMCPMC112108
OpenAlexW2022327161

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.