Evidence map›Paper›PMID 10835378›Full record

ArticleGenetics2000

Identification of a novel allele of SIR3 defective in the maintenance, but not the establishment, of silencing in Saccharomyces cerevisiae.

S Enomoto, S D Johnston, J Berman

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Chromatin architectural proteins.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2006
    Review
  5. Article
  6. Review
  7. Sir3-dependent assembly of supramolecular chromatin structures in vitro.Proceedings of the National Academy of Sciences of the United States of America · 2001
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

S EnomotoDepartment of Genetics, Cell Biology and Development, University of Minnesota, St. Paul 55108, USA.
S D Johnston
J Berman
University of Minnesota · US

Funding

IDENTIFICATION OF TELOMERE END BINDING PROTEINS IN YEASTF32GM019065 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI JOHNSTON, STEPHEN D · 1997 to 1999
–
MUTAGENIC ANALYSIS OF ADH INDUCTION IN PLANTSR01GM038616 · NIGMS · UNIVERSITY OF GEORGIA (UGA) · PI SPINDLER, KATHERINE R. · 1987 to 1989
–
NIGMS NIH HHS 1 F32 GM19065-01NIGMS NIH HHS GM38616
6 · The paper itself

Abstract

Using a screen for genes that affect telomere function, we isolated sir3-P898R, an allele of SIR3 that reduces telomeric silencing yet does not affect mating. While sir3-P898R mutations cause no detectable mating defect in quantitative assays, they result in synergistic mating defects in combination with mutations such as sir1 that affect the establishment of silencing. In contrast, sir3-P898R in combination with a cac1 mutation, which affects the maintenance of silencing, does not result in synergistic mating defects. MATa sir3-P898R mutants form shmoo clusters in response to alpha-factor, and sir3-P898R strains are capable of establishing silencing at a previously derepressed HML locus with kinetics like that of wild-type SIR3 strains. These results imply that Sir3-P898Rp is defective in the maintenance, but not the establishment of silencing. In addition, overexpression of a C-terminal fragment of Sir3-P898R results in a dominant nonmating phenotype: HM silencing is completely lost at both HML and HMR. Furthermore, HM silencing is most vulnerable to disruption by the Sir3-P898R C terminus immediately after S-phase, the time when new silent chromatin is assembled onto newly replicated DNA.

Indexed as

AllelesGene SilencingSilent Information Regulator Proteins, Saccharomyces cerevisiaeBase SequenceDNA PrimersFungal ProteinsMutationSaccharomyces cerevisiaeTelomereTrans-ActivatorsDNA PrimersFungal ProteinsSilent Information Regulator Proteins, Saccharomyces cerevisiaeSIR3 protein, S cerevisiaeTrans-Activators

Identifiers

PMID10835378
PMCPMC1461117
OpenAlexW2104171795

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.