Evidence map›Paper›PMID 10835355›Full record

ArticleThe EMBO journal2000

Saccharomyces cerevisiae Ras/cAMP pathway controls post-diauxic shift element-dependent transcription through the zinc finger protein Gis1.

I Pedruzzi, N Bürckert, P Egger, C De Virgilio

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed, 214 citations in OpenAlex.

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39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

I PedruzziBotanisches Institut der Universität, Hebelstrasse 1, CH-4056 Basel, Switzerland.
N Bürckert
P Egger
C De Virgilio
University of Basel · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Saccharomyces cerevisiae protein kinase Rim15 was identified previously as a component of the Ras/cAMP pathway acting immediately downstream of cAMP-dependent protein kinase (cAPK) to control a broad range of adaptations in response to nutrient limitation. Here, we show that the zinc finger protein Gis1 acts as a dosage-dependent suppressor of the rim15Delta defect in nutrient limitation-induced transcriptional derepression of SSA3. Loss of Gis1 results in a defect in transcriptional derepression upon nutrient limitation of various genes that are negatively regulated by the Ras/cAMP pathway (e.g. SSA3, HSP12 and HSP26). Tests of epistasis as well as transcriptional analyses of Gis1-dependent expression indicate that Gis1 acts in this pathway downstream of Rim15 to mediate transcription from the previously identified post-diauxic shift (PDS) element. Accordingly, deletion of GIS1 partially suppresses, and overexpression of GIS1 exacerbates the growth defect of mutant cells that are compromised for cAPK activity. Moreover, PDS element-driven expression, which is negatively regulated by the Ras/cAMP pathway and which is induced upon nutrient limitation, is almost entirely dependent on the presence of Gis1.

Indexed as

Gene Expression Regulation, FungalSaccharomyces cerevisiae ProteinsTranscription, GeneticBacterial ProteinsBinding SitesCell Cycle ProteinsCell DivisionCulture MediaCyclic AMPCyclic AMP-Dependent Protein KinasesDNA, FungalEpistasis, GeneticFungal ProteinsGene DosageGenes, ReporterHeat-Shock ProteinsBacterial ProteinsCell Cycle ProteinsCulture MediaCyclic AMPCyclic AMP-Dependent Protein KinasesDNA, FungalFungal ProteinsGIS1 protein, S cerevisiaeHeat-Shock ProteinsHistone DemethylasesHSP70 Heat-Shock ProteinsLexA Repressor ProteinProtein Kinasesras ProteinsRecombinant Fusion ProteinsRepressor ProteinsRim15 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSerine EndopeptidasesSOK2 protein, S cerevisiaeSSA3 protein, S cerevisiae

Identifiers

PMID10835355
PMCPMC212766
OpenAlexW2059085198

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.