Evidence map›Paper›PMID 10829077›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2000

The SOS response regulates adaptive mutation.

G J McKenzie, R S Harris, P L Lee, S M Rosenberg

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 124 papers.

0numbers the graph read from it
0cells of the map it votes in
124citing papers in PubMed
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

124 citing papers in PubMed, 293 citations in OpenAlex.

  1. Article
  2. On the role of dcm and vsr in Escherichia coli adaptive mutation.Molecular genetics and genomics : MGG · 2025
    Article
  3. Article
  4. Expression ofFrontiers in cellular and infection microbiology · 2025
    Article
  5. Review
  6. Review
  7. Article
  8. The Evolutionary Interplay of Somatic and Germline Mutation Rates.Annual review of biomedical data science · 2024
    Review
  9. Microbiology and molecular biology reviews : MMBR · 2024
    Review
  10. Article
  11. A perspective on tumor radiation resistance following high-LET radiation treatment.Journal of cancer research and clinical oncology · 2024
    Review
  12. Article
  13. Article
  14. Age of Antibiotic Resistance in MDR/XDR Clinical Pathogen ofPharmaceuticals (Basel, Switzerland) · 2023
    Review
  15. Generation and Repair of Postreplication Gaps in Escherichia coli.Microbiology and molecular biology reviews : MMBR · 2023
    Review
  16. Article
  17. Article
  18. Article
  19. Evolution of antimicrobial resistance inFrontiers in microbiology · 2023
    Article
  20. Review

64 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 3 countries.

G J McKenzieDepartment of Molecular and Human Genetics, Baylor College of Medicine, One Baylor Plaza, Houston, TX 77030, USA.
R S Harris
P L Lee
S M Rosenberg
Baylor College of Medicine · USUniversity of Alberta · CA

Funding

MOLECULAR MECHANISMS /STRESS-INDUCED MUTATION /E. COLIR01GM053158 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI ROSENBERG, SUSAN M · 1997 to 2014
$7.4M
DNA REPAIR IN DRUG RESISTANCE MUTATIONR01AI043917 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI ROSENBERG, SUSAN M. · 1998 to 2003
$880k
NIAID NIH HHS R01 AI43917NIGMS NIH HHS R01 GM053158NIGMS NIH HHS R01 GM53158
6 · The paper itself

Abstract

Upon starvation some Escherichia coli cells undergo a transient, genome-wide hypermutation (called adaptive mutation) that is recombination-dependent and appears to be a response to a stressful environment. Adaptive mutation may reflect an inducible mechanism that generates genetic variability in times of stress. Previously, however, the regulatory components and signal transduction pathways controlling adaptive mutation were unknown. Here we show that adaptive mutation is regulated by the SOS response, a complex, graded response to DNA damage that includes induction of gene products blocking cell division and promoting mutation, recombination, and DNA repair. We find that SOS-induced levels of proteins other than RecA are needed for adaptive mutation. We report a requirement of RecF for efficient adaptive mutation and provide evidence that the role of RecF in mutation is to allow SOS induction. We also report the discovery of an SOS-controlled inhibitor of adaptive mutation, PsiB. These results indicate that adaptive mutation is a tightly regulated response, controlled both positively and negatively by the SOS system.

Indexed as

Adaptation, PhysiologicalEscherichia coli ProteinsMutationSOS Response, GeneticsBacterial ProteinsDNA-Binding ProteinsDNA RepairLexA Repressor ProteinRegulonSerine EndopeptidasesSignal TransductionBacterial ProteinsDNA-Binding ProteinsEscherichia coli ProteinsLexA Repressor ProteinrecF protein, BacteriarecF protein, E coliSerine Endopeptidases

Identifiers

PMID10829077
PMCPMC18688
OpenAlexW2037722651

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.