Evidence map›Paper›PMID 10825206›Full record

ArticleMolecular and cellular biology2000

A zinc finger transcription factor, alphaA-crystallin binding protein 1, is a negative regulator of the chondrocyte-specific enhancer of the alpha1(II) collagen gene.

K Tanaka, Y Matsumoto, F Nakatani, Y Iwamoto, Y Yamada

RetractedErratum issuedOpen access · greenAbstract readRetracted Publication
In one paragraph

Article in Molecular and cellular biology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Review
  3. Uncoupling of growth plate maturation and bone formation in mice lacking both Schnurri-2 and Schnurri-3.Proceedings of the National Academy of Sciences of the United States of America · 2010
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  7. Review
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  10. Transcriptional coactivator PGC-1alpha regulates chondrogenesis via association with Sox9.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Inhibition of NF-kappaB by ZAS3, a zinc-finger protein that also binds to the kappaB motif.Proceedings of the National Academy of Sciences of the United States of America · 2003
    Article
  16. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 2 countries.

K TanakaCraniofacial Developmental Biology and Regeneration Branch, National Institute of Dental and Craniofacial Research, National Institutes of Health, Bethesda, Maryland 20892, USA.
Y Matsumoto
F Nakatani
Y Iwamoto
Y Yamada
National Institutes of Health · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcription of the type II collagen gene (Col2a1) is regulated by multiple cis-acting sites. The enhancer element, which is located in the first intron, is necessary for high-level and cartilage-specific expression of Col2a1. A mouse limb bud cDNA expression library was screened by the Saccharomyces cerevisiae one-hybrid screening method to identify protein factors bound to the enhancer. A zinc finger protein, alphaA-crystallin binding protein 1 (CRYBP1), which had been reported to bind to the mouse alphaA-crystallin gene promoter, was isolated. We herein demonstrate that CRYBP1 is involved in the negative regulation of Col2a1 enhancer activity. CRYBP1 mRNA expression was downregulated during chondrocyte differentiation in vitro. In situ hybridization analysis of developing mouse cartilage showed that CRYBP1 mRNA was also downregulated during mesenchymal condensation and that CRYBP1 mRNA was highly expressed by hypertrophic chondrocytes, but at very low levels by resting and proliferating chondrocytes. Expression of recombinant CRYBP1 in a transfected rat chondrosarcoma cell line inhibited Col2a1 enhancer activity. Electrophoretic mobility shift assays showed that CRYBP1 bound a specific sequence within the Col2a1 enhancer and inhibited the binding of Sox9, an activator for Col2a1, to the enhancer. Cotransfection of CRYBP1 with Sox9 into BALB/c 3T3 cells inhibited activation of the Col2a1 enhancer by Sox9. These results suggest a novel mechanism that negatively regulates cartilage-specific expression of Col2a1.

Indexed as

Gene Expression RegulationAnimalsChondrocytesCollagenDNA-Binding ProteinsDNA, ComplementaryEnhancer Elements, GeneticMiceOrgan SpecificityRatsRecombinant ProteinsTranscription FactorsTranscription, GeneticTumor Cells, CulturedZinc FingersCollagenDNA-Binding ProteinsDNA, ComplementaryHivep1 protein, mouseRecombinant ProteinsTranscription Factors

Identifiers

PMID10825206
PMCPMC85810
OpenAlexW2096144146

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.