Evidence map›Paper›PMID 10811909›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2000

An essential intermediate in the folding of dihydrofolate reductase.

D K Heidary, J C O'Neill, M Roy, P A Jennings

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. FtsH degrades dihydrofolate reductase by recognizing a partially folded species.Protein science : a publication of the Protein Society · 2022
    Article
  6. Review
  7. Article
  8. Article
  9. Cotranslational folding allows misfolding-prone proteins to circumvent deep kinetic traps.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  10. How cooperative are protein folding and unfolding transitions?Protein science : a publication of the Protein Society · 2016
    Review
  11. Article
  12. Folding pathway of a multidomain protein depends on its topology of domain connectivity.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. A protein folding pathway with multiple folding intermediates at atomic resolution.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  18. Article
  19. Integrating folding kinetics and protein function: biphasic kinetics and dual binding specificity in a WW domain.Proceedings of the National Academy of Sciences of the United States of America · 2004
    Article
  20. An amino acid code for protein folding.Proceedings of the National Academy of Sciences of the United States of America · 2001
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

D K HeidaryDepartment of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093-0359, USA.
J C O'Neill
M Roy
P A Jennings
Pennsylvania State University · USUniversity of California, San Diego · US

Funding

Contemporary Approaches to Cancer Cell Signaling and CommunicationT32CA009523 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DONOGHUE, DANIEL J, YANG, JING · 1985 to 2025
$12.1M
MOLECULAR BIOPHYSICS TRAINING PROGRAMT32GM008326 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KOMIVES, ELIZABETH A. · 1989 to 2020
$7.5M
Investigation of the Functional/Folding Landscapes of the Il-1 FamilyR01GM054038 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JENNINGS, PATRICIA A · 2002 to 2010
$2.4M
FOLDING MECHANISM OF A BETA PROTEINR29GM054038 · NIGMS · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI JENNINGS, PATRICIA A · 1996 to 2000
$106k
NCI NIH HHS CA 09523NCI NIH HHS T32 CA009523NIGMS NIH HHS GM 08326NIGMS NIH HHS GM 54038NIGMS NIH HHS R01 GM054038NIGMS NIH HHS R29 GM054038NIGMS NIH HHS T32 GM008326
6 · The paper itself

Abstract

The folding of Escherichia coli dihydrofolate reductase was examined at pH 7.8 and 15 degrees C by using stopped-flow fluorescence and absorbance spectroscopies. The formation of a highly fluorescent intermediate occurs with relaxation times ranging between 142 and 343 msec, whereas stopped-flow absorbance spectroscopy using methotrexate binding assays shows a distinct lag phase during these time frames for the native state. The lag in absorbance kinetics and the lack of fast-track folding events indicate that the formation of this ensemble of intermediates is an obligatory step in the folding reaction.

Indexed as

Bacterial ProteinsEscherichia coliMethotrexateModels, MolecularProtein BindingProtein ConformationProtein FoldingSpectrometry, FluorescenceTetrahydrofolate DehydrogenaseBacterial ProteinsMethotrexateTetrahydrofolate Dehydrogenase

Identifiers

PMID10811909
PMCPMC18525
OpenAlexW2005717963

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.