Evidence map›Paper›PMID 10793149›Full record

ArticleMolecular biology of the cell2000

The yeast heat shock transcription factor changes conformation in response to superoxide and temperature.

S Lee, T Carlson, N Christian, K Lea, J Kedzie, J P Reilly, J J Bonner

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 60 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

S LeeDepartments of Biology and Chemistry, Indiana University, Bloomington, Indiana 47405-3700, USA.
T Carlson
N Christian
K Lea
J Kedzie
J P Reilly
J J Bonner
Indiana University Bloomington · US

Funding

POSTTRANSLATIONAL REGULATION OF HSF ACTIVITYR01GM051853 · NIGMS · INDIANA UNIVERSITY BLOOMINGTON · PI BONNER, JAMES J · 1996 to 2002
$362k
NIGMS NIH HHS GM51853
6 · The paper itself

Abstract

In vitro DNA-binding assays demonstrate that the heat shock transcription factor (HSF) from the yeast Saccharomyces cerevisiae can adopt an altered conformation when stressed. This conformation, reflected in a change in electrophoretic mobility, requires that two HSF trimers be bound to DNA. Single trimers do not show this change, which appears to represent an alteration in the cooperative interactions between trimers. HSF isolated from stressed cells displays a higher propensity to adopt this altered conformation. Purified HSF can be stimulated in vitro to undergo the conformational change by elevating the temperature or by exposing HSF to superoxide anion. Mutational analysis maps a region critical for this conformational change to the flexible loop between the minimal DNA-binding domain and the flexible linker that joins the DNA-binding domain to the trimerization domain. The significance of these findings is discussed in the context of the induction of the heat shock response by ischemic stroke, hypoxia, and recovery from anoxia, all known to stimulate the production of superoxide.

Indexed as

Saccharomyces cerevisiae ProteinsTemperatureAmino Acid SequenceConserved SequenceDNADNA-Binding ProteinsEvolution, MolecularFungal ProteinsGlutathioneHeat-Shock ProteinsMagnesiumMolecular Sequence DataMutationOxygenPhenanthrolinesProtein Conformation1,10-phenanthrolineDNADNA-Binding ProteinsFungal ProteinsGlutathioneHeat-Shock ProteinsHSF1 protein, S cerevisiaeMagnesiumOxygenPhenanthrolinesSaccharomyces cerevisiae ProteinsSuperoxide DismutaseSuperoxidesTranscription Factors

Identifiers

PMID10793149
PMCPMC14881
OpenAlexW2161117554

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.