Evidence map›Paper›PMID 10781079›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2000

Prolyl 4-hydroxylase is required for viability and morphogenesis in Caenorhabditis elegans.

L Friedman, J J Higgin, G Moulder, R Barstead, R T Raines, J Kimble

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. The invertebrate Caenorhabditis elegans biosynthesizes ascorbate.Archives of biochemistry and biophysics · 2015
    Article
  13. Regulation of axonal midline guidance by prolyl 4-hydroxylation in Caenorhabditis elegans.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2014
    Article
  14. Article
  15. Prolyl 4 hydroxylase: a critical target in the pathophysiology of diseases.The Korean journal of physiology & pharmacology : official journal of the Korean Physiological Society and the Korean Society of Pharmacology · 2013
    Article
  16. Review
  17. Article
  18. Prolyl 4-hydroxylase.Critical reviews in biochemistry and molecular biology · 2010
    Review
  19. Article
  20. Origin of the stability conferred upon collagen by fluorination.Bioorganic & medicinal chemistry letters · 2009
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

L FriedmanDepartments of Biochemistry and Chemistry, and Howard Hughes Medical Institute, University of Wisconsin, Madison, WI 53706, USA.
J J Higgin
G Moulder
R Barstead
R T Raines
J Kimble

Funding

COLLAGEN STRUCTURE AND STABILITY IN VITRO AND IN VIVOR01AR044276 · NIAMS · UNIVERSITY OF WISCONSIN-MADISON · PI RAINES, RONALD T · 1996 to 2017
$5.6M
LARGE SCALE HIGH THROUGHPUT GENE KNOCKOUT IN C ELEGANSR01HG001843 · NHGRI · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI BARSTEAD, ROBERT JAMES · 1998 to 2005
$4.5M
Chemistry and Biology of CollagenR56AR044276 · NIAMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI RAINES, RONALD T · 2019 to 2020
$826k
NHGRI NIH HHS HG01843-01NHGRI NIH HHS R01 HG001843NIAMS NIH HHS R01 AR044276NIAMS NIH HHS R56 AR044276NIA NIH HHS AG44276
6 · The paper itself

Abstract

The genome of Caenorhabditis elegans possesses two genes, dpy-18 and phy-2, that encode alpha subunits of the enzyme prolyl 4-hydroxylase. We have generated deletions within each gene to eliminate prolyl 4-hydroxylase activity from the animal. The dpy-18 mutant has an aberrant body morphology, consistent with a role of prolyl 4-hydroxylase in formation of the body cuticle. The phy-2 mutant is phenotypically wild type. However, the dpy-18; phy-2 double mutant is not viable, suggesting an essential role for prolyl 4-hydroxylase that is normally accomplished by either dpy-18 or phy-2. The effects of the double mutation were mimicked by small-molecule inhibitors of prolyl 4-hydroxylase, validating the genetic results and suggesting that C. elegans can serve as a model system for the discovery of new inhibitors.

Indexed as

Amino Acid SequenceAnimalsCaenorhabditis elegansChickensGenetic LinkageHumansMacromolecular SubstancesMiceMolecular Sequence DataMorphogenesisMutagenesisPhylogenyProcollagen-Proline DioxygenaseRatsReproducibility of ResultsSequence AlignmentMacromolecular SubstancesProcollagen-Proline Dioxygenase

Identifiers

PMID10781079
PMCPMC18302

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.