Evidence map›Paper›PMID 10779335›Full record

ArticleMolecular and cellular biology2000

Long palindromic sequences induce double-strand breaks during meiosis in yeast.

F Nasar, C Jankowski, D K Nag

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 103 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Dimerization of thebioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. Article
  7. invertiaDB: A Database of Inverted Repeats Across Organismal Genomes.bioRxiv : the preprint server for biology · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Hotspots of Human Mutation.Trends in genetics : TIG · 2021
    Review
  13. Alternative DNA StructuresMicrobiology and molecular biology reviews : MMBR · 2021
    Review
  14. Mechanism and Control of Meiotic DNA Double-Strand Break Formation inFrontiers in cell and developmental biology · 2021
    Review
  15. Distinct roles foreLife · 2019
    Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Thirty-thousand-year-old distant relative of giant icosahedral DNA viruses with a pandoravirus morphology.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

F NasarMolecular Genetics Program, Wadsworth Center, School of Public Health, State University of New York, Albany, New York 12201, USA.
C Jankowski
D K Nag
Wadsworth Center · USUniversity at Albany, State University of New York · US

Funding

STABILITY OF INVERTED DNA REPEATS IN YEASTR01GM056266 · NIGMS · WADSWORTH CENTER · PI NAG, DILIP K · 1998 to 2000
$151k
NIGMS NIH HHS GM56266
6 · The paper itself

Abstract

Inverted-repeated or palindromic sequences have been found to occur in both prokaryotic and eukaryotic genomes. Such repeated sequences are usually short and present at several functionally important regions in the genome. However, long palindromic sequences are rare and are a major source of genomic instability. The palindrome-mediated genomic instability is believed to be due to cruciform or hairpin formation and subsequent cleavage of this structure by structure-specific nucleases. Here we present both genetic and physical evidence that long palindromic sequences (>50 bp) generate double-strand breaks (DSBs) at a high frequency during meiosis in the yeast Saccharomyces cerevisiae. The palindrome-mediated DSB formation depends on the primary sequence of the inverted repeat and the location and length of the repeated units. The DSB formation at the palindrome requires all of the gene products that are known to be responsible for DSB formation at the normal meiosis-specific sites. Since DSBs are initiators of nearly all meiotic recombination events, most of the palindrome-induced breaks appear to be repaired by homologous recombination. Our results suggest that short palindromic sequences are highly stable in vivo. In contrast, long palindromic sequences make the genome unstable by inducing DSBs and such sequences are usually removed from the genome by homologous recombination events.

Indexed as

DNA DamageDNA Transposable ElementsRepetitive Sequences, Nucleic AcidSaccharomyces cerevisiae ProteinsAlcohol OxidoreductasesAllelesAminohydrolasesBase SequenceDNA-Binding ProteinsDNA Repair EnzymesEndonucleasesFungal ProteinsGene ConversionGenes, FungalMeiosisMolecular Sequence DataAlcohol OxidoreductasesAminohydrolasesDNA-Binding ProteinsDNA Repair EnzymesDNA Transposable ElementsEndonucleasesFungal ProteinsHIS4 protein, S cerevisiaeMSH2 protein, S cerevisiaeMutS Homolog 2 ProteinPyrophosphatasesRAD1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTranscription Factors

Identifiers

PMID10779335
PMCPMC85638
OpenAlexW2161817820

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.