Evidence map›Paper›PMID 10775598›Full record

ArticleJournal of virology2000

Identification of a key target sequence to block human immunodeficiency virus type 1 replication within the gag-pol transframe domain.

S Sei, Q E Yang, D O'Neill, K Yoshimura, K Nagashima, H Mitsuya

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Article
  3. Design of embedded chimeric peptide nucleic acids that efficiently enter and accurately reactivate gene expression in vivo.Proceedings of the National Academy of Sciences of the United States of America · 2010
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

S SeiHIV Clinical Interface Laboratory, SAIC-Frederick, NCI-Frederick Cancer Research and Development Center, Frederick, Maryland 21702, USA. SEI@dtpax2.ncifcrf.gov
Q E Yang
D O'Neill
K Yoshimura
K Nagashima
H Mitsuya
Interface (United States) · USKumamoto University · JPNational Cancer Institute · USScience Applications International Corporation (United States) · US

Funding

OPERATIONS &TECHNICAL SUPPORTN01CO056000 · CO · SCIENCE APPLICATIONS INTERNATIONAL CORP · PI FISCHINGER, PETER J · 1995 to 2000
$95.0M
NCI NIH HHS N01-CO-56000
6 · The paper itself

Abstract

Although the full sequence of the human immunodeficiency virus type 1 (HIV-1) genome has been known for more than a decade, effective genetic antivirals have yet to be developed. Here we show that, of 22 regions examined, one highly conserved sequence (ACTCTTTGGCAACGA) near the 3' end of the HIV-1 gag-pol transframe region, encoding viral protease residues 4 to 8 and a C-terminal Vpr-binding motif of p6(Gag) protein in two different reading frames, can be successfully targeted by an antisense peptide nucleic acid oligomer named PNA(PR2). A disrupted translation of gag-pol mRNA induced at the PNA(PR2)-annealing site resulted in a decreased synthesis of Pr160(Gag-Pol) polyprotein, hence the viral protease, a predominant expression of Pr55(Gag) devoid of a fully functional p6(Gag) protein, and the excessive intracellular cleavage of Gag precursor proteins, hindering the processes of virion assembly. Treatment with PNA(PR2) abolished virion production by up to 99% in chronically HIV-1-infected H9 cells and in peripheral blood mononuclear cells infected with clinical HIV-1 isolates with the multidrug-resistant phenotype. This particular segment of the gag-pol transframe gene appears to offer a distinctive advantage over other regions in invading viral structural genes and restraining HIV-1 replication in infected cells and may potentially be exploited as a novel antiviral genetic target.

Indexed as

Gene Targeting3' Untranslated RegionsAnti-HIV AgentsBase SequenceCell LineCells, CulturedEnzyme ActivationFusion Proteins, gag-polgag Gene Products, Human Immunodeficiency VirusGene Products, gagHIV-1HIV Core Protein p24HIV InfectionsHIV ProteaseHumansMolecular Sequence Data3' Untranslated RegionsAnti-HIV AgentsFusion Proteins, gag-polgag Gene Products, Human Immunodeficiency VirusGene Products, gagHIV Core Protein p24HIV Proteasep55 gag precursor protein, Human immunodeficiency virus 1Peptide Nucleic Acidspol Gene Products, Human Immunodeficiency Viruspr160 gag-pol precursor protein, Human immunodeficiency virus 1Protein Precursors

Identifiers

PMID10775598
PMCPMC111982
OpenAlexW2151682372

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.