Evidence map›Paper›PMID 10775527›Full record

ArticleAmerican journal of human genetics2000

Identification of the alpha-aminoadipic semialdehyde synthase gene, which is defective in familial hyperlysinemia.

K A Sacksteder, B J Biery, J C Morrell, B K Goodman, B V Geisbrecht, R P Cox, S J Gould, M T Geraghty

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 116 citations in OpenAlex.

  1. Article
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  4. Article
  5. Targeting Lysine α-Ketoglutarate Reductase to Treat Pyridoxine-Dependent Epilepsy.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
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  19. Review
  20. The Metabolite Saccharopine Impairs Neuronal Development by Inhibiting the Neurotrophic Function of Glucose-6-Phosphate Isomerase.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

K A SackstederDepartment of Biological Chemistry, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.
B J Biery
J C Morrell
B K Goodman
B V Geisbrecht
R P Cox
S J Gould
M T Geraghty
Johns Hopkins University · USJohns Hopkins Medicine · USThe University of Texas Southwestern Medical Center · US

Funding

VERY LONG CHAIN FATTY ACYL-COA SYNTHETASE IN ADRENOLEUKODYSTROPHYP01HD010981 · NICHD · KENNEDY KRIEGER CHILDRENS HOSPITAL · PI SMITH, KIRBY D · 1985 to 2006
$11.5M
MOLECULAR ANALYSIS OF PEROXISOME ASSEMBLYR01DK045787 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI GOULD, STEPHEN J · 1993 to 2011
$4.7M
NICHD NIH HHS HD10981NIDDK NIH HHS DK45787
6 · The paper itself

Abstract

The first two steps in the mammalian lysine-degradation pathway are catalyzed by lysine-ketoglutarate reductase and saccharopine dehydrogenase, respectively, resulting in the conversion of lysine to alpha-aminoadipic semialdehyde. Defects in one or both of these activities result in familial hyperlysinemia, an autosomal recessive condition characterized by hyperlysinemia, lysinuria, and variable saccharopinuria. In yeast, lysine-ketoglutarate reductase and saccharopine dehydrogenase are encoded by the LYS1 and LYS9 genes, respectively, and we searched the available sequence databases for their human homologues. We identified a single cDNA that encoded an apparently bifunctional protein, with the N-terminal half similar to that of yeast LYS1 and with the C-terminal half similar to that of yeast LYS9. This bifunctional protein has previously been referred to as "alpha-aminoadipic semialdehyde synthase," and we have tentatively designated this gene "AASS." The AASS cDNA contains an open reading frame of 2,781 bp predicted to encode a 927-amino-acid-long protein. The gene has been sequenced and contains 24 exons scattered over 68 kb and maps to chromosome 7q31.3. Northern blot analysis revealed the presence of several transcripts in all tissues examined, with the highest expression occurring in the liver. We sequenced the genomic DNA from a single patient with hyperlysinemia (JJa). The patient is the product of a consanguineous mating and is homozygous for an out-of-frame 9-bp deletion in exon 15, which results in a premature stop codon at position 534 of the protein. On the basis of these and other results, we propose that AASS catalyzes the first two steps of the major lysine-degradation pathway in human cells and that inactivating mutations in the AASS gene are a cause of hyperlysinemia.

Indexed as

Amino Acid SequenceBase SequenceChromosomes, Human, Pair 7Cloning, MolecularConsanguinityDNA Mutational AnalysisExonsFemaleGene Expression ProfilingGenes, RecessiveHomozygoteHumansHyperlysinemiasIn Situ Hybridization, FluorescenceLysineMaleAASS protein, humanLysineMultienzyme ComplexesRNA, MessengerRNA Splice SitesSaccharopine Dehydrogenases

Identifiers

PMID10775527
PMCPMC1378037
OpenAlexW1966269470

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.